Zinc in PDB 5na6: Structure of Cys-Null Se-Met Dpp III From Bacteroides Thetaiotaomicron

Enzymatic activity of Structure of Cys-Null Se-Met Dpp III From Bacteroides Thetaiotaomicron

Protein crystallography data

Other elements in 5na6:

Zinc Binding Sites:

Zinc binding site 1 out of 1 in 5na6

Zinc Binding Sites List in 5na6

Zinc binding site 1 out of 1 in the Structure of Cys-Null Se-Met Dpp III From Bacteroides Thetaiotaomicron


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Cys-Null Se-Met Dpp III From Bacteroides Thetaiotaomicron within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn701 b:28.4 occ:0.78 NE2 A:HIS453 2.1 31.6 1.0 NE2 A:HIS448 2.1 25.0 1.0 O1 A:TRS707 2.1 36.3 0.5 N A:TRS707 2.1 37.6 0.5 OE1 A:GLU476 2.2 28.7 1.0 N A:TRS707 2.2 37.6 0.5 O2 A:TRS707 2.4 38.5 0.5 C1 A:TRS707 2.6 37.3 0.5 C A:TRS707 2.8 37.9 0.5 C A:TRS707 2.9 37.9 0.5 C1 A:TRS707 3.0 37.3 0.5 CE1 A:HIS448 3.0 24.6 1.0 CE1 A:HIS453 3.0 31.8 1.0 CD A:GLU476 3.1 30.1 1.0 CD2 A:HIS453 3.1 32.5 1.0 CD2 A:HIS448 3.1 26.3 1.0 O2 A:TRS707 3.1 39.1 0.5 C2 A:TRS707 3.2 38.6 0.5 OE2 A:GLU476 3.2 33.0 1.0 C2 A:TRS707 3.6 38.4 0.5 O1 A:TRS707 4.0 36.6 0.5 O A:HOH1004 4.1 45.0 1.0 C3 A:TRS707 4.1 38.2 0.5 ND1 A:HIS453 4.2 32.2 1.0 ND1 A:HIS448 4.2 24.8 1.0 CG A:HIS453 4.2 32.9 1.0 O3 A:TRS707 4.2 37.6 0.5 CG A:HIS448 4.3 25.0 1.0 C3 A:TRS707 4.3 38.1 0.5 CE1 A:HIS533 4.4 30.5 1.0 CG A:GLU476 4.5 28.7 1.0 CB A:ALA479 4.7 24.1 1.0 O3 A:TRS707 4.8 38.3 0.5 CB A:GLU476 5.0 25.4 1.0

Reference: