Zinc in PDB 5n7y: Solution Structure of B. Subtilis Sigma G Inhibitor Csfb
Zinc Binding Sites:
The binding sites of Zinc atom in the Solution Structure of B. Subtilis Sigma G Inhibitor Csfb
(pdb code 5n7y). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the
Solution Structure of B. Subtilis Sigma G Inhibitor Csfb, PDB code: 5n7y:
Jump to Zinc binding site number:
1;
2;
Zinc binding site 1 out
of 2 in 5n7y
Go back to
Zinc Binding Sites List in 5n7y
Zinc binding site 1 out
of 2 in the Solution Structure of B. Subtilis Sigma G Inhibitor Csfb
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Solution Structure of B. Subtilis Sigma G Inhibitor Csfb within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Zn101
b:0.0
occ:1.00
|
SG
|
A:CYS30
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS33
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS14
|
2.3
|
0.0
|
1.0
|
SG
|
A:CYS11
|
2.3
|
0.0
|
1.0
|
HB
|
A:ILE13
|
2.6
|
0.0
|
1.0
|
H
|
A:CYS14
|
3.0
|
0.0
|
1.0
|
HB3
|
A:CYS30
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS33
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS14
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS30
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS33
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS14
|
3.4
|
0.0
|
1.0
|
CB
|
A:CYS11
|
3.5
|
0.0
|
1.0
|
H
|
A:CYS30
|
3.5
|
0.0
|
1.0
|
HB2
|
A:CYS11
|
3.5
|
0.0
|
1.0
|
H
|
A:CYS33
|
3.5
|
0.0
|
1.0
|
N
|
A:CYS14
|
3.6
|
0.0
|
1.0
|
HB3
|
A:CYS11
|
3.7
|
0.0
|
1.0
|
CB
|
A:ILE13
|
3.7
|
0.0
|
1.0
|
OH
|
C:TYR25
|
3.8
|
0.0
|
1.0
|
HG13
|
A:ILE13
|
3.9
|
0.0
|
1.0
|
HB3
|
A:ASP32
|
4.0
|
0.0
|
1.0
|
HE2
|
C:TYR25
|
4.0
|
0.0
|
1.0
|
HH
|
C:TYR25
|
4.1
|
0.0
|
1.0
|
CA
|
A:CYS14
|
4.1
|
0.0
|
1.0
|
N
|
A:CYS30
|
4.1
|
0.0
|
1.0
|
HB3
|
A:CYS33
|
4.2
|
0.0
|
1.0
|
N
|
A:CYS33
|
4.2
|
0.0
|
1.0
|
HB2
|
A:CYS30
|
4.2
|
0.0
|
1.0
|
H
|
A:ILE13
|
4.2
|
0.0
|
1.0
|
CA
|
A:CYS30
|
4.2
|
0.0
|
1.0
|
CG1
|
A:ILE13
|
4.2
|
0.0
|
1.0
|
HG22
|
A:ILE13
|
4.3
|
0.0
|
1.0
|
HG12
|
A:ILE13
|
4.3
|
0.0
|
1.0
|
HB3
|
A:CYS14
|
4.3
|
0.0
|
1.0
|
CZ
|
C:TYR25
|
4.3
|
0.0
|
1.0
|
CA
|
A:CYS33
|
4.4
|
0.0
|
1.0
|
CE2
|
C:TYR25
|
4.4
|
0.0
|
1.0
|
CG2
|
A:ILE13
|
4.4
|
0.0
|
1.0
|
O
|
A:CYS30
|
4.5
|
0.0
|
1.0
|
C
|
A:ILE13
|
4.5
|
0.0
|
1.0
|
HA
|
A:CYS14
|
4.5
|
0.0
|
1.0
|
HG21
|
A:ILE13
|
4.5
|
0.0
|
1.0
|
CA
|
A:ILE13
|
4.6
|
0.0
|
1.0
|
C
|
A:CYS30
|
4.6
|
0.0
|
1.0
|
H
|
A:ASP32
|
4.7
|
0.0
|
1.0
|
HG21
|
A:ILE29
|
4.7
|
0.0
|
1.0
|
HA
|
A:CYS33
|
4.8
|
0.0
|
1.0
|
N
|
A:ILE13
|
4.8
|
0.0
|
1.0
|
HD2
|
A:LYS36
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS11
|
4.9
|
0.0
|
1.0
|
HG3
|
A:LYS18
|
4.9
|
0.0
|
1.0
|
HG22
|
A:ILE29
|
5.0
|
0.0
|
1.0
|
|
Zinc binding site 2 out
of 2 in 5n7y
Go back to
Zinc Binding Sites List in 5n7y
Zinc binding site 2 out
of 2 in the Solution Structure of B. Subtilis Sigma G Inhibitor Csfb
Mono view
Stereo pair view
|
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Solution Structure of B. Subtilis Sigma G Inhibitor Csfb within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Zn101
b:0.0
occ:1.00
|
SG
|
C:CYS30
|
2.3
|
0.0
|
1.0
|
SG
|
C:CYS33
|
2.3
|
0.0
|
1.0
|
SG
|
C:CYS14
|
2.3
|
0.0
|
1.0
|
SG
|
C:CYS11
|
2.3
|
0.0
|
1.0
|
HB
|
C:ILE13
|
2.6
|
0.0
|
1.0
|
H
|
C:CYS14
|
2.9
|
0.0
|
1.0
|
HB2
|
C:CYS33
|
3.2
|
0.0
|
1.0
|
HB3
|
C:CYS30
|
3.2
|
0.0
|
1.0
|
HB2
|
C:CYS14
|
3.3
|
0.0
|
1.0
|
CB
|
C:CYS30
|
3.3
|
0.0
|
1.0
|
CB
|
C:CYS33
|
3.4
|
0.0
|
1.0
|
CB
|
C:CYS14
|
3.4
|
0.0
|
1.0
|
CB
|
C:CYS11
|
3.5
|
0.0
|
1.0
|
H
|
C:CYS30
|
3.5
|
0.0
|
1.0
|
HB2
|
C:CYS11
|
3.5
|
0.0
|
1.0
|
H
|
C:CYS33
|
3.5
|
0.0
|
1.0
|
N
|
C:CYS14
|
3.6
|
0.0
|
1.0
|
HB3
|
C:CYS11
|
3.7
|
0.0
|
1.0
|
CB
|
C:ILE13
|
3.7
|
0.0
|
1.0
|
OH
|
A:TYR25
|
3.8
|
0.0
|
1.0
|
HG13
|
C:ILE13
|
3.9
|
0.0
|
1.0
|
HB3
|
C:ASP32
|
4.0
|
0.0
|
1.0
|
HE2
|
A:TYR25
|
4.0
|
0.0
|
1.0
|
CA
|
C:CYS14
|
4.1
|
0.0
|
1.0
|
HH
|
A:TYR25
|
4.1
|
0.0
|
1.0
|
N
|
C:CYS30
|
4.1
|
0.0
|
1.0
|
HB3
|
C:CYS33
|
4.1
|
0.0
|
1.0
|
N
|
C:CYS33
|
4.2
|
0.0
|
1.0
|
HB2
|
C:CYS30
|
4.2
|
0.0
|
1.0
|
H
|
C:ILE13
|
4.2
|
0.0
|
1.0
|
CA
|
C:CYS30
|
4.2
|
0.0
|
1.0
|
CG1
|
C:ILE13
|
4.2
|
0.0
|
1.0
|
HG22
|
C:ILE13
|
4.3
|
0.0
|
1.0
|
HG12
|
C:ILE13
|
4.3
|
0.0
|
1.0
|
HB3
|
C:CYS14
|
4.3
|
0.0
|
1.0
|
CZ
|
A:TYR25
|
4.3
|
0.0
|
1.0
|
CA
|
C:CYS33
|
4.3
|
0.0
|
1.0
|
CE2
|
A:TYR25
|
4.4
|
0.0
|
1.0
|
CG2
|
C:ILE13
|
4.4
|
0.0
|
1.0
|
O
|
C:CYS30
|
4.4
|
0.0
|
1.0
|
C
|
C:ILE13
|
4.5
|
0.0
|
1.0
|
HA
|
C:CYS14
|
4.5
|
0.0
|
1.0
|
HG21
|
C:ILE13
|
4.5
|
0.0
|
1.0
|
CA
|
C:ILE13
|
4.5
|
0.0
|
1.0
|
C
|
C:CYS30
|
4.6
|
0.0
|
1.0
|
HG21
|
C:ILE29
|
4.7
|
0.0
|
1.0
|
H
|
C:ASP32
|
4.7
|
0.0
|
1.0
|
HA
|
C:CYS33
|
4.8
|
0.0
|
1.0
|
HD2
|
C:LYS36
|
4.8
|
0.0
|
1.0
|
N
|
C:ILE13
|
4.8
|
0.0
|
1.0
|
CA
|
C:CYS11
|
4.9
|
0.0
|
1.0
|
HG3
|
C:LYS18
|
4.9
|
0.0
|
1.0
|
HG22
|
C:ILE29
|
5.0
|
0.0
|
1.0
|
|
Reference:
S.Martinez-Lumbreras,
C.Alfano,
N.J.Evans,
K.M.Collins,
K.A.Flanagan,
R.A.Atkinson,
E.M.Krysztofinska,
A.Vydyanath,
J.Jackter,
S.Fixon-Owoo,
A.H.Camp,
R.L.Isaacson.
Structural and Functional Insights Into Bacillus Subtilis Sigma Factor Inhibitor, Csfb. Structure V. 26 640 2018.
ISSN: ISSN 1878-4186
PubMed: 29526435
DOI: 10.1016/J.STR.2018.02.007
Page generated: Sun Oct 27 22:38:37 2024
|