Zinc in PDB 5lnk: Entire Ovine Respiratory Complex I

The structure of Entire Ovine Respiratory Complex I also contains other interesting chemical elements:

Iron

(Fe)

28 atoms

The binding sites of Zinc atom in the Entire Ovine Respiratory Complex I (pdb code 5lnk). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Entire Ovine Respiratory Complex I, PDB code: 5lnk:

Zinc binding site 1 out of 1 in the Entire Ovine Respiratory Complex I


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Entire Ovine Respiratory Complex I within 5.0Å range: probe atom residue distance (Å) B Occ b:Zn300 b:84.4 occ:1.00 NE2 b:HIS68 2.0 62.3 1.0 SG b:CYS87 2.3 65.4 1.0 SG b:CYS84 2.3 63.5 1.0 SG b:CYS59 2.3 72.3 1.0 CE1 b:HIS68 2.9 62.3 1.0 CD2 b:HIS68 3.0 62.3 1.0 CB b:CYS87 3.1 65.4 1.0 CB b:CYS84 3.3 63.5 1.0 CB b:CYS59 3.3 72.3 1.0 N b:CYS87 3.4 64.8 1.0 CA b:CYS87 3.9 64.8 1.0 ND1 b:HIS68 3.9 62.3 1.0 CG b:HIS68 4.0 62.3 1.0 CA b:GLY61 4.1 66.2 1.0 N b:GLY61 4.3 66.2 1.0 CB b:TYR86 4.3 57.9 1.0 C b:TYR86 4.5 62.2 1.0 CA b:CYS59 4.6 67.5 1.0 O b:CYS59 4.6 67.5 1.0 C b:CYS59 4.7 67.5 1.0 CA b:CYS84 4.7 67.1 1.0 N b:TYR86 4.8 62.2 1.0 CA b:TYR86 4.8 62.2 1.0 N b:GLY88 5.0 69.8 1.0 C b:ASP60 5.0 66.4 1.0

K.Fiedorczuk, J.A.Letts, G.Degliesposti, K.Kaszuba, M.Skehel, L.A.Sazanov. Atomic Structure of the Entire Mammalian Mitochondrial Complex I. Nature V. 538 406 2016.
ISSN: ESSN 1476-4687
PubMed: 27595392
DOI: 10.1038/NATURE19794