Atomistry » Zinc » PDB 5l03-5lbz » 5lbu
Atomistry »
  Zinc »
    PDB 5l03-5lbz »
      5lbu »

Zinc in PDB 5lbu: Structure of the Human Quinone Reductase 2 (NQO2) in Complex with to CL097

Enzymatic activity of Structure of the Human Quinone Reductase 2 (NQO2) in Complex with to CL097

All present enzymatic activity of Structure of the Human Quinone Reductase 2 (NQO2) in Complex with to CL097:
1.10.5.1;

Protein crystallography data

The structure of Structure of the Human Quinone Reductase 2 (NQO2) in Complex with to CL097, PDB code: 5lbu was solved by S.Schneider, O.Gross, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.30 / 1.65
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 57.694, 80.853, 106.016, 90.00, 90.00, 90.00
R / Rfree (%) 18 / 20.8

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of the Human Quinone Reductase 2 (NQO2) in Complex with to CL097 (pdb code 5lbu). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of the Human Quinone Reductase 2 (NQO2) in Complex with to CL097, PDB code: 5lbu:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 5lbu

Go back to Zinc Binding Sites List in 5lbu
Zinc binding site 1 out of 2 in the Structure of the Human Quinone Reductase 2 (NQO2) in Complex with to CL097


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Human Quinone Reductase 2 (NQO2) in Complex with to CL097 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:22.6
occ:1.00
ND1 A:HIS173 2.1 21.9 1.0
O A:CYS222 2.2 21.5 1.0
ND1 A:HIS177 2.2 22.2 1.0
SG A:CYS222 2.2 22.5 1.0
CB A:CYS222 2.8 21.6 1.0
C A:CYS222 3.0 21.8 1.0
CG A:HIS177 3.1 22.3 1.0
CE1 A:HIS173 3.1 22.4 1.0
CG A:HIS173 3.2 21.5 1.0
CE1 A:HIS177 3.2 23.4 1.0
CB A:HIS177 3.3 21.2 1.0
CA A:CYS222 3.4 21.8 1.0
CB A:HIS173 3.5 21.0 1.0
CA A:HIS173 3.7 20.3 1.0
N A:THR223 4.1 21.3 1.0
NE2 A:HIS173 4.2 22.6 1.0
CD2 A:HIS177 4.2 22.7 1.0
NE2 A:HIS177 4.3 22.6 1.0
CD2 A:HIS173 4.3 21.9 1.0
N A:HIS173 4.6 19.2 1.0
N A:CYS222 4.6 21.8 1.0
CA A:THR223 4.6 22.7 1.0
C A:HIS173 4.6 20.3 1.0
O A:GLN172 4.7 19.6 1.0
O A:HIS173 4.7 20.3 1.0
CA A:HIS177 4.8 20.4 1.0
C A:GLN172 4.9 19.6 1.0

Zinc binding site 2 out of 2 in 5lbu

Go back to Zinc Binding Sites List in 5lbu
Zinc binding site 2 out of 2 in the Structure of the Human Quinone Reductase 2 (NQO2) in Complex with to CL097


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of the Human Quinone Reductase 2 (NQO2) in Complex with to CL097 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn302

b:22.2
occ:1.00
SG B:CYS222 2.1 21.9 1.0
O B:CYS222 2.1 22.0 1.0
ND1 B:HIS173 2.2 22.1 1.0
ND1 B:HIS177 2.3 24.7 1.0
CB B:CYS222 2.8 22.6 1.0
C B:CYS222 2.9 24.0 1.0
CG B:HIS177 3.1 22.9 1.0
CE1 B:HIS173 3.1 22.0 1.0
CG B:HIS173 3.2 21.5 1.0
CB B:HIS177 3.2 21.1 1.0
CE1 B:HIS177 3.3 24.5 1.0
CA B:CYS222 3.4 24.0 1.0
CB B:HIS173 3.5 20.9 1.0
CA B:HIS173 3.6 19.5 1.0
N B:THR223 4.0 24.8 1.0
NE2 B:HIS173 4.2 22.3 1.0
CD2 B:HIS177 4.2 22.9 1.0
CD2 B:HIS173 4.3 22.3 1.0
NE2 B:HIS177 4.3 24.0 1.0
N B:CYS222 4.5 25.0 1.0
N B:HIS173 4.5 19.4 1.0
C B:HIS173 4.6 18.9 1.0
O B:GLN172 4.6 18.8 1.0
O B:HIS173 4.6 19.5 1.0
CA B:THR223 4.7 24.7 1.0
CA B:HIS177 4.7 20.1 1.0
CE1 B:HIS227 4.9 21.2 1.0
C B:GLN172 4.9 18.9 1.0
CZ3 B:TRP169 5.0 20.6 1.0

Reference:

C.Gross, R.Mishra, K.Schneider, G.Medard, J.Wettmarshausen, D.Dittlein, O.Gorka, P.-A.Koenig, S.Fromm, G.Magnani, T.Cikovic, L.Hartjes, J.Smollich, A.Robertson, M.Cooper, M.Schmidt-Supprian, M.Schuster, K.Schroder, P.Broz, C.Traidl-Hoffmann, B.Kuester, J.Ruland, S.Schneider, F.Perocchi, O.Gross. Imiquimod Inhibits Mitochondrial Complex I and Induces K+ Efflux-Independent NLRP3 Inflammasome Activation Via NEK7 To Be Published.
Page generated: Sun Oct 27 20:54:46 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy