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Zinc in PDB 5gpo: The Sensor Domain Structure of the Zinc-Responsive Histidine Kinase Czcs From Pseudomonas Aeruginosa

Enzymatic activity of The Sensor Domain Structure of the Zinc-Responsive Histidine Kinase Czcs From Pseudomonas Aeruginosa

All present enzymatic activity of The Sensor Domain Structure of the Zinc-Responsive Histidine Kinase Czcs From Pseudomonas Aeruginosa:
2.7.13.3;

Protein crystallography data

The structure of The Sensor Domain Structure of the Zinc-Responsive Histidine Kinase Czcs From Pseudomonas Aeruginosa, PDB code: 5gpo was solved by D.Wang, W.Z.Chen, S.Q.Huang, X.C.Liu, Q.Y.Hu, T.B.Wei, J.H.Gan, H.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.75 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 93.337, 47.705, 57.528, 90.00, 91.63, 90.00
R / Rfree (%) 21 / 25.3

Zinc Binding Sites:

The binding sites of Zinc atom in the The Sensor Domain Structure of the Zinc-Responsive Histidine Kinase Czcs From Pseudomonas Aeruginosa (pdb code 5gpo). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the The Sensor Domain Structure of the Zinc-Responsive Histidine Kinase Czcs From Pseudomonas Aeruginosa, PDB code: 5gpo:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 5gpo

Go back to Zinc Binding Sites List in 5gpo
Zinc binding site 1 out of 2 in the The Sensor Domain Structure of the Zinc-Responsive Histidine Kinase Czcs From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Sensor Domain Structure of the Zinc-Responsive Histidine Kinase Czcs From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:21.9
occ:0.50
OD2 A:ASP60 2.0 21.9 1.0
NE2 A:HIS55 2.1 25.1 1.0
CG A:ASP60 2.7 28.9 1.0
OD1 A:ASP60 2.7 24.4 1.0
CD2 A:HIS55 2.9 18.7 1.0
CE1 A:HIS55 3.2 22.6 1.0
CG A:HIS55 4.1 20.4 1.0
CB A:ASP60 4.1 25.8 1.0
ND1 A:HIS55 4.2 26.2 1.0
O A:HOH345 4.3 37.4 1.0
O A:HOH400 4.5 37.8 1.0
O A:HOH351 4.5 37.6 1.0

Zinc binding site 2 out of 2 in 5gpo

Go back to Zinc Binding Sites List in 5gpo
Zinc binding site 2 out of 2 in the The Sensor Domain Structure of the Zinc-Responsive Histidine Kinase Czcs From Pseudomonas Aeruginosa


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of The Sensor Domain Structure of the Zinc-Responsive Histidine Kinase Czcs From Pseudomonas Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn201

b:27.0
occ:1.00
NE2 B:HIS72 1.9 28.6 1.0
NE2 A:HIS72 2.1 30.6 1.0
OD2 B:ASP76 2.1 34.3 1.0
CE1 B:HIS72 2.7 28.5 1.0
CG B:ASP76 2.9 26.1 1.0
CE1 A:HIS72 2.9 26.1 1.0
CD2 B:HIS72 3.0 32.0 1.0
OD1 B:ASP76 3.0 26.1 1.0
CD2 A:HIS72 3.1 26.5 1.0
ND1 B:HIS72 3.8 37.9 1.0
CG B:HIS72 4.0 27.8 1.0
ND1 A:HIS72 4.1 22.7 1.0
CG A:HIS72 4.2 25.2 1.0
CB B:ASP76 4.3 22.0 1.0
O B:HOH380 4.7 35.0 1.0
NE2 A:GLN75 4.8 28.4 1.0
O B:HIS72 4.9 27.7 1.0

Reference:

D.Wang, W.Chen, S.Huang, Y.He, X.Liu, Q.Hu, T.Wei, H.Shang, J.Gan, H.Chen. Structural Basis of Zn(II) Induced Metal Detoxification and Antibiotic Resistance By Histidine Kinase Czcs in Pseudomonas Aeruginosa Plos Pathog. V. 13 06533 2017.
ISSN: ESSN 1553-7374
PubMed: 28732057
DOI: 10.1371/JOURNAL.PPAT.1006533
Page generated: Wed Dec 16 06:19:41 2020

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