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Zinc in PDB 5e68: High Resolution Crystal Structure of Luxs - Quorum Sensor Molecular Complex From Salmonella Typhi at 1.58 Angstroms

Enzymatic activity of High Resolution Crystal Structure of Luxs - Quorum Sensor Molecular Complex From Salmonella Typhi at 1.58 Angstroms

All present enzymatic activity of High Resolution Crystal Structure of Luxs - Quorum Sensor Molecular Complex From Salmonella Typhi at 1.58 Angstroms:
4.4.1.21;

Protein crystallography data

The structure of High Resolution Crystal Structure of Luxs - Quorum Sensor Molecular Complex From Salmonella Typhi at 1.58 Angstroms, PDB code: 5e68 was solved by P.Perumal, R.Raina, A.Arockiasamy, N.Sundarabaalaji, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.71 / 1.58
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 48.345, 66.427, 54.310, 90.00, 106.17, 90.00
R / Rfree (%) 16 / 19.6

Zinc Binding Sites:

The binding sites of Zinc atom in the High Resolution Crystal Structure of Luxs - Quorum Sensor Molecular Complex From Salmonella Typhi at 1.58 Angstroms (pdb code 5e68). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the High Resolution Crystal Structure of Luxs - Quorum Sensor Molecular Complex From Salmonella Typhi at 1.58 Angstroms, PDB code: 5e68:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 5e68

Go back to Zinc Binding Sites List in 5e68
Zinc binding site 1 out of 2 in the High Resolution Crystal Structure of Luxs - Quorum Sensor Molecular Complex From Salmonella Typhi at 1.58 Angstroms


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of High Resolution Crystal Structure of Luxs - Quorum Sensor Molecular Complex From Salmonella Typhi at 1.58 Angstroms within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn201

b:20.2
occ:0.80
O A:HOH404 2.0 25.6 1.0
NE2 A:HIS54 2.1 19.2 1.0
NE2 A:HIS58 2.1 19.4 1.0
SG A:CYS128 2.3 22.2 1.0
CE1 A:HIS54 2.8 18.6 1.0
CE1 A:HIS58 3.0 22.9 1.0
CD2 A:HIS54 3.2 18.8 1.0
CD2 A:HIS58 3.2 21.0 1.0
CB A:CYS128 3.4 21.9 1.0
NE2 A:HIS134 3.8 19.6 1.0
CA A:CYS128 4.0 20.9 1.0
ND1 A:HIS54 4.0 19.9 1.0
CE1 A:HIS134 4.1 22.0 1.0
ND1 A:HIS58 4.1 21.6 1.0
CG A:HIS54 4.2 16.7 1.0
CB B:CSD83 4.2 17.3 1.0
CG A:HIS58 4.3 19.3 1.0
N A:GLY129 4.4 20.1 1.0
OD1 B:CSD83 4.4 27.0 1.0
C A:CYS128 4.6 21.9 1.0
SG B:CSD83 4.7 20.8 1.0
OE1 A:GLU57 4.8 32.0 1.0
O B:HOH303 5.0 34.7 1.0
N A:THR130 5.0 18.1 1.0
O A:HOH403 5.0 52.1 1.0

Zinc binding site 2 out of 2 in 5e68

Go back to Zinc Binding Sites List in 5e68
Zinc binding site 2 out of 2 in the High Resolution Crystal Structure of Luxs - Quorum Sensor Molecular Complex From Salmonella Typhi at 1.58 Angstroms


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of High Resolution Crystal Structure of Luxs - Quorum Sensor Molecular Complex From Salmonella Typhi at 1.58 Angstroms within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn201

b:17.9
occ:0.80
O A:HOH407 2.1 16.6 1.0
NE2 B:HIS54 2.1 19.3 1.0
NE2 B:HIS58 2.1 15.7 1.0
SG B:CYS128 2.3 19.2 1.0
CE1 B:HIS54 2.9 16.9 1.0
CE1 B:HIS58 2.9 18.1 1.0
CD2 B:HIS58 3.2 18.7 1.0
CD2 B:HIS54 3.2 17.4 1.0
CB B:CYS128 3.3 17.3 1.0
NE2 B:HIS134 3.8 18.3 1.0
CA B:CYS128 3.9 17.6 1.0
ND1 B:HIS54 4.0 17.8 1.0
ND1 B:HIS58 4.1 18.2 1.0
CE1 B:HIS134 4.1 20.5 1.0
CG B:HIS54 4.2 15.6 1.0
CG B:HIS58 4.2 15.1 1.0
N B:GLY129 4.3 17.1 1.0
CB A:CSD83 4.4 16.2 1.0
C B:CYS128 4.5 17.4 1.0
OD1 A:CSD83 4.6 29.4 1.0
SG A:CSD83 4.9 20.0 1.0
N B:THR130 5.0 13.9 1.0

Reference:

P.Perumal, R.Raina, A.Arockiasamy, N.Sundarabaalaji. High Resolution Crystal Structure of Luxs - Quorum Sensor Molecular Complex From Salmonella Typhi at 1.58 Angstroms To Be Published.
Page generated: Wed Dec 16 06:09:06 2020

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