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Zinc in PDB 5bz0: Crystal Structure of Ibv Papain-Like Protease Plpro C101S Mutant in Complex with Ubiquitin

Enzymatic activity of Crystal Structure of Ibv Papain-Like Protease Plpro C101S Mutant in Complex with Ubiquitin

All present enzymatic activity of Crystal Structure of Ibv Papain-Like Protease Plpro C101S Mutant in Complex with Ubiquitin:
2.7.7.48; 3.6.4.12; 3.6.4.13;

Protein crystallography data

The structure of Crystal Structure of Ibv Papain-Like Protease Plpro C101S Mutant in Complex with Ubiquitin, PDB code: 5bz0 was solved by L.Y.Kong, L.M.Yan, Y.Zhang, Z.H.Rao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.68 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 63.058, 74.812, 95.502, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 22.8

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Ibv Papain-Like Protease Plpro C101S Mutant in Complex with Ubiquitin (pdb code 5bz0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Ibv Papain-Like Protease Plpro C101S Mutant in Complex with Ubiquitin, PDB code: 5bz0:

Zinc binding site 1 out of 1 in 5bz0

Go back to Zinc Binding Sites List in 5bz0
Zinc binding site 1 out of 1 in the Crystal Structure of Ibv Papain-Like Protease Plpro C101S Mutant in Complex with Ubiquitin


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Ibv Papain-Like Protease Plpro C101S Mutant in Complex with Ubiquitin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn400

b:21.9
occ:1.00
 SG A:CYS180 2.3 16.3 1.0
SG A:CYS182 2.3 21.0 1.0
SG A:CYS217 2.3 21.5 1.0
SG A:CYS214 2.4 20.9 1.0
CB A:CYS214 3.1 20.2 1.0
CB A:CYS182 3.1 20.7 1.0
CB A:CYS217 3.2 21.5 1.0
CB A:CYS180 3.3 17.7 1.0
N A:CYS182 3.4 23.6 1.0
N A:CYS217 3.6 22.6 1.0
CA A:CYS182 3.9 27.2 1.0
O A:HOH621 3.9 21.1 1.0
CA A:CYS217 4.0 22.0 1.0
N A:ASN181 4.2 20.5 1.0
C A:ASN181 4.5 25.3 1.0
CB A:THR216 4.5 23.3 1.0
CA A:CYS180 4.6 18.1 1.0
C A:CYS180 4.6 22.0 1.0
CA A:CYS214 4.6 22.1 1.0
C A:THR216 4.7 28.0 1.0
CA A:ASN181 4.8 22.8 1.0
O A:HOH719 4.8 27.6 1.0
C A:CYS217 4.9 24.4 1.0
CA A:THR216 5.0 26.4 1.0
O A:CYS214 5.0 21.0 1.0
C A:CYS214 5.0 22.2 1.0
N A:THR216 5.0 24.2 1.0

Reference:

L.Y.Kong, L.M.Yan, Y.Zhang, Z.H.Rao. Crystal Structure of Ibv Papain-Like Protease Plpro C101S Mutant in Complex with Ubiquitin To Be Published.
Page generated: Sun Oct 27 13:37:34 2024

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