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Zinc in PDB 5a50: The Crystal Structure of Arabidopsis Thaliana CAR4 in Complex with Two Calcium Ions, Zn and Phopho Choline

Protein crystallography data

The structure of The Crystal Structure of Arabidopsis Thaliana CAR4 in Complex with Two Calcium Ions, Zn and Phopho Choline, PDB code: 5a50 was solved by M.Diaz, A.Albert, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.56 / 2.40
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 35.737, 89.150, 112.475, 90.00, 90.00, 90.00
R / Rfree (%) 19.5 / 24.5

Other elements in 5a50:

The structure of The Crystal Structure of Arabidopsis Thaliana CAR4 in Complex with Two Calcium Ions, Zn and Phopho Choline also contains other interesting chemical elements:

Calcium (Ca) 4 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the The Crystal Structure of Arabidopsis Thaliana CAR4 in Complex with Two Calcium Ions, Zn and Phopho Choline (pdb code 5a50). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Crystal Structure of Arabidopsis Thaliana CAR4 in Complex with Two Calcium Ions, Zn and Phopho Choline, PDB code: 5a50:

Zinc binding site 1 out of 1 in 5a50

Go back to Zinc Binding Sites List in 5a50
Zinc binding site 1 out of 1 in the The Crystal Structure of Arabidopsis Thaliana CAR4 in Complex with Two Calcium Ions, Zn and Phopho Choline


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of Arabidopsis Thaliana CAR4 in Complex with Two Calcium Ions, Zn and Phopho Choline within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn204

b:25.1
occ:1.00
O4 B:PC205 1.7 37.6 1.0
OD2 B:ASP109 2.0 22.6 1.0
ND1 B:HIS103 2.2 22.7 1.0
P1 B:PC205 2.3 48.3 1.0
O1 B:PC205 2.5 37.5 1.0
CG B:ASP109 2.7 26.1 1.0
O3 B:PC205 2.8 23.5 1.0
OD1 B:ASP109 2.8 25.2 1.0
CE1 B:HIS103 2.9 25.4 1.0
CG B:HIS103 3.3 26.6 1.0
O B:HOH303 3.6 21.4 1.0
O2 B:PC205 3.8 32.7 1.0
CB B:HIS103 3.8 22.1 1.0
CA B:HIS103 4.0 22.3 1.0
NE2 B:HIS103 4.1 28.1 1.0
OH B:TYR58 4.1 23.0 1.0
CE1 B:TYR58 4.2 20.8 1.0
CB B:ASP109 4.2 23.2 1.0
CD2 B:HIS103 4.3 26.8 1.0
N B:ASP104 4.4 21.6 1.0
CZ B:TYR58 4.5 25.0 1.0
O B:ASP104 4.5 27.1 1.0
C B:HIS103 4.6 21.4 1.0
O B:HOH307 4.7 32.5 1.0
C1 B:PC205 4.8 36.5 1.0
O B:HOH313 4.8 42.5 1.0

Reference:

M.Diaz, M.J.Sanchez-Barrena, J.M.Gonzalez-Rubio, L.Rodriguez, D.Fernandez, R.Antoni, C.Yunta, B.Belda-Palazon, M.Gonzalez-Guzman, M.Peirats-Llobet, M.Menendez, J.Boskovic, J.A.Marquez, P.L.Rodriguez, A.Albert. Calcium-Dependent Oligomerization of Car Proteins at Cell Membrane Modulates Aba Signaling. Proc.Natl.Acad.Sci.Usa V. 113 E396 2016.
ISSN: ISSN 0027-8424
PubMed: 26719420
DOI: 10.1073/PNAS.1512779113
Page generated: Wed Dec 16 06:01:35 2020

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