Zinc in PDB 4z3f: Crystal Structure of the Lectin Domain of Papg From E. Coli BI47 in Complex with SSEA4 in Space Group P21

The structure of Crystal Structure of the Lectin Domain of Papg From E. Coli BI47 in Complex with SSEA4 in Space Group P21, PDB code: 4z3f was solved by R.P.Jakob, G.Navarra, P.Zihlmann, K.Stangier, R.C.Preston, S.Rabbani, T.Maier, B.Ernst, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.86 / 1.80
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	45.110, 53.380, 48.820, 90.00, 96.05, 90.00
R / Rfree (%)	20.1 / 22.5

The binding sites of Zinc atom in the Crystal Structure of the Lectin Domain of Papg From E. Coli BI47 in Complex with SSEA4 in Space Group P21 (pdb code 4z3f). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of the Lectin Domain of Papg From E. Coli BI47 in Complex with SSEA4 in Space Group P21, PDB code: 4z3f:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the Crystal Structure of the Lectin Domain of Papg From E. Coli BI47 in Complex with SSEA4 in Space Group P21


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Lectin Domain of Papg From E. Coli BI47 in Complex with SSEA4 in Space Group P21 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn207 b:25.2 occ:1.00 NE2 A:HIS83 2.1 26.9 1.0 O A:HOH391 2.2 32.6 1.0 CD2 A:HIS83 3.0 26.4 1.0 CE1 A:HIS83 3.1 26.4 1.0 CG A:HIS83 4.2 24.9 1.0 ND1 A:HIS83 4.3 26.8 1.0 NE2 A:GLN27 4.3 23.7 1.0 O A:HOH460 4.3 55.6 1.0 OE1 A:GLN27 4.4 30.4 1.0 CD A:GLN27 4.8 31.6 1.0

Zinc binding site 2 out of 2 in the Crystal Structure of the Lectin Domain of Papg From E. Coli BI47 in Complex with SSEA4 in Space Group P21


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of the Lectin Domain of Papg From E. Coli BI47 in Complex with SSEA4 in Space Group P21 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn208 b:44.2 occ:1.00 OD2 A:ASP143 2.4 36.7 1.0 OD1 A:ASP143 2.7 28.6 1.0 CG A:ASP143 2.9 29.4 1.0 CD2 A:TYR76 4.3 25.6 1.0 CB A:ASP143 4.3 26.3 1.0 CE2 A:TYR76 4.4 26.8 1.0 O A:HOH325 4.5 42.0 1.0 CB A:PRO141 4.7 24.0 1.0 CD A:PRO77 5.0 24.7 1.0

G.Navarra, P.Zihlmann, R.P.Jakob, K.Stangier, R.C.Preston, S.Rabbani, T.Maier, B.Ernst. An Unexpected Way Nature Improves Solvation Entropy To Be Published.