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Zinc in PDB 4x36: Crystal Structure of the Autolysin Lyta From Streptococcus Pneumoniae TIGR4

Enzymatic activity of Crystal Structure of the Autolysin Lyta From Streptococcus Pneumoniae TIGR4

All present enzymatic activity of Crystal Structure of the Autolysin Lyta From Streptococcus Pneumoniae TIGR4:
3.5.1.28;

Protein crystallography data

The structure of Crystal Structure of the Autolysin Lyta From Streptococcus Pneumoniae TIGR4, PDB code: 4x36 was solved by W.Cheng, Q.Li, C.Z.Zhou, Y.X.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.63 / 2.10
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 101.282, 101.282, 119.577, 90.00, 90.00, 90.00
R / Rfree (%) 18.3 / 19.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Autolysin Lyta From Streptococcus Pneumoniae TIGR4 (pdb code 4x36). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Autolysin Lyta From Streptococcus Pneumoniae TIGR4, PDB code: 4x36:

Zinc binding site 1 out of 1 in 4x36

Go back to Zinc Binding Sites List in 4x36
Zinc binding site 1 out of 1 in the Crystal Structure of the Autolysin Lyta From Streptococcus Pneumoniae TIGR4


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Autolysin Lyta From Streptococcus Pneumoniae TIGR4 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn407

b:35.9
occ:1.00
OD2 A:ASP149 2.0 33.5 1.0
ND1 A:HIS133 2.1 36.0 1.0
O A:HOH563 2.1 41.6 1.0
ND1 A:HIS26 2.2 35.5 1.0
CG A:ASP149 2.9 33.3 1.0
OD1 A:ASP149 3.0 37.7 1.0
CG A:HIS133 3.1 36.1 1.0
CE1 A:HIS133 3.1 36.0 1.0
CE1 A:HIS26 3.1 37.0 1.0
CG A:HIS26 3.2 33.4 1.0
CB A:HIS133 3.3 35.4 1.0
CB A:HIS26 3.5 31.1 1.0
CA A:HIS26 4.0 32.6 1.0
O A:HOH614 4.2 45.4 1.0
NE2 A:HIS133 4.2 38.9 1.0
CD2 A:HIS133 4.2 34.0 1.0
O A:HOH577 4.3 42.3 1.0
NE2 A:HIS26 4.3 33.4 1.0
CB A:ASP149 4.3 31.5 1.0
CD2 A:HIS26 4.3 32.7 1.0
OE2 A:GLU87 4.4 45.5 1.0
O A:SER27 4.4 36.1 1.0
CD2 A:HIS147 4.4 53.1 1.0
O A:ASP73 4.5 37.0 1.0
O A:HOH738 4.5 60.5 1.0
N A:SER27 4.5 29.9 1.0
CB A:HIS147 4.7 39.5 1.0
CA A:HIS133 4.8 37.0 1.0
CG A:HIS147 4.8 46.7 1.0
C A:HIS26 4.9 32.6 1.0
OE1 A:GLU87 4.9 48.0 1.0
CD A:GLU87 4.9 45.0 1.0

Reference:

W.Cheng, Q.Li, Y.L.Jiang, C.Z.Zhou, Y.X.Chen. Full-Length Structure of the Major Autolysin Lyta To Be Published.
Page generated: Wed Dec 16 05:52:37 2020

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