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Zinc in PDB 4ruw: The Crystal Structure of Endonuclease/Exonuclease/Phosphatase From Beutenbergia Cavernae Dsm 12333

Protein crystallography data

The structure of The Crystal Structure of Endonuclease/Exonuclease/Phosphatase From Beutenbergia Cavernae Dsm 12333, PDB code: 4ruw was solved by R.Wu, R.Jedrzejczak, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.39 / 1.28
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 121.995, 81.121, 46.854, 90.00, 95.91, 90.00
R / Rfree (%) 13.8 / 14.8

Zinc Binding Sites:

The binding sites of Zinc atom in the The Crystal Structure of Endonuclease/Exonuclease/Phosphatase From Beutenbergia Cavernae Dsm 12333 (pdb code 4ruw). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Crystal Structure of Endonuclease/Exonuclease/Phosphatase From Beutenbergia Cavernae Dsm 12333, PDB code: 4ruw:

Zinc binding site 1 out of 1 in 4ruw

Go back to Zinc Binding Sites List in 4ruw
Zinc binding site 1 out of 1 in the The Crystal Structure of Endonuclease/Exonuclease/Phosphatase From Beutenbergia Cavernae Dsm 12333


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of Endonuclease/Exonuclease/Phosphatase From Beutenbergia Cavernae Dsm 12333 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn501

b:15.9
occ:1.00
OD2 A:ASP97 1.9 16.1 1.0
ND1 A:HIS95 2.0 14.9 1.0
NE2 A:HIS134 2.0 17.4 1.0
ND1 A:HIS104 2.1 16.8 1.0
CG A:ASP97 2.8 15.4 1.0
CE1 A:HIS104 2.9 18.5 1.0
CE1 A:HIS95 3.0 14.6 1.0
CD2 A:HIS134 3.0 18.3 1.0
CE1 A:HIS134 3.0 17.0 1.0
CG A:HIS95 3.0 13.9 1.0
OD1 A:ASP97 3.1 15.7 1.0
CG A:HIS104 3.1 17.6 1.0
CB A:HIS95 3.4 13.6 1.0
CB A:HIS104 3.6 17.5 1.0
N A:HIS104 3.9 18.4 1.0
NE2 A:HIS95 4.1 15.4 1.0
NE2 A:HIS104 4.1 18.7 1.0
ND1 A:HIS134 4.1 18.3 1.0
CG A:HIS134 4.1 19.2 1.0
CD2 A:HIS95 4.1 14.4 1.0
CB A:ASP97 4.2 17.4 1.0
CD2 A:HIS104 4.2 18.8 1.0
CA A:HIS104 4.4 17.8 1.0
O A:GLY102 4.6 22.4 1.0
O A:HOH692 4.7 27.2 1.0
C A:SER103 4.7 20.1 1.0
O A:HOH932 4.7 40.6 1.0
CB A:SER142 4.8 17.4 1.0
CA A:HIS95 4.9 13.7 1.0
CA A:SER103 4.9 19.9 1.0

Reference:

R.Wu, R.Jedrzejczak, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg). The Crystal Structure of Endonuclease/Exonuclease/Phosphatase From Beutenbergia Cavernae Dsm 12333 To Be Published.
Page generated: Wed Dec 16 05:46:20 2020

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