Zinc in PDB 4row: The Crystal Structure of Novel APOBEC3G CD2 Head-to-Tail Dimer Suggests the Binding Mode of Full-Length APOBEC3G to Hiv-1 Ssdna

The structure of The Crystal Structure of Novel APOBEC3G CD2 Head-to-Tail Dimer Suggests the Binding Mode of Full-Length APOBEC3G to Hiv-1 Ssdna, PDB code: 4row was solved by X.Lu, T.Zhang, Z.Xu, S.Liu, B.Zhao, W.Lan, C.Wang, J.Ding, C.Cao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.31 / 1.70
Space group	P 2 21 21
Cell size a, b, c (Å), α, β, γ (°)	35.308, 70.007, 82.347, 90.00, 90.00, 90.00
R / Rfree (%)	14.7 / 18.8

The binding sites of Zinc atom in the The Crystal Structure of Novel APOBEC3G CD2 Head-to-Tail Dimer Suggests the Binding Mode of Full-Length APOBEC3G to Hiv-1 Ssdna (pdb code 4row). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Crystal Structure of Novel APOBEC3G CD2 Head-to-Tail Dimer Suggests the Binding Mode of Full-Length APOBEC3G to Hiv-1 Ssdna, PDB code: 4row:

Zinc binding site 1 out of 1 in the The Crystal Structure of Novel APOBEC3G CD2 Head-to-Tail Dimer Suggests the Binding Mode of Full-Length APOBEC3G to Hiv-1 Ssdna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of Novel APOBEC3G CD2 Head-to-Tail Dimer Suggests the Binding Mode of Full-Length APOBEC3G to Hiv-1 Ssdna within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn401 b:16.1 occ:1.00 O A:HOH612 2.0 14.2 1.0 ND1 A:HIS257 2.0 16.5 1.0 SG A:CYS288 2.3 14.6 1.0 SG A:CYS291 2.3 15.3 1.0 CE1 A:HIS257 2.9 19.8 1.0 CG A:HIS257 3.1 15.1 1.0 CB A:CYS291 3.1 13.4 1.0 CB A:CYS288 3.3 13.4 1.0 CB A:HIS257 3.5 13.4 1.0 O A:HOH590 3.9 24.0 1.0 N A:CYS288 3.9 10.6 1.0 OE2 A:GLU259 4.0 14.7 1.0 N A:CYS291 4.0 14.0 1.0 O A:HOH536 4.0 26.0 1.0 NE2 A:HIS257 4.1 20.9 1.0 CA A:CYS288 4.1 11.4 1.0 CA A:CYS291 4.1 13.1 1.0 CD2 A:HIS257 4.1 19.1 1.0 OG A:SER290 4.5 26.2 1.0 O A:HOH615 4.5 25.7 1.0 C A:CYS288 4.6 13.0 1.0 O A:CYS288 4.6 12.3 1.0 CD A:GLU259 4.7 13.8 1.0 CA A:HIS257 5.0 12.5 1.0

X.Lu, T.Zhang, Z.Xu, S.Liu, B.Zhao, W.Lan, C.Wang, J.Ding, C.Cao. Crystal Structure of Dna Cytidine Deaminase ABOBEC3G Catalytic Domain Suggests A Binding Mode of Full-Length Enzyme to Single-Stranded Dna To Be Published.