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Zinc in PDB 4pt5: Crystal Structure of Plpro From Middle East Respiratory Syndrome (Mers) Coronavirus

Enzymatic activity of Crystal Structure of Plpro From Middle East Respiratory Syndrome (Mers) Coronavirus

All present enzymatic activity of Crystal Structure of Plpro From Middle East Respiratory Syndrome (Mers) Coronavirus:
3.4.22.2;

Protein crystallography data

The structure of Crystal Structure of Plpro From Middle East Respiratory Syndrome (Mers) Coronavirus, PDB code: 4pt5 was solved by H.Lei, B.D.Santarsiero, H.Lee, M.E.Johnson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.88 / 2.59
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 100.820, 47.260, 88.770, 90.00, 121.60, 90.00
R / Rfree (%) 22.9 / 29.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Plpro From Middle East Respiratory Syndrome (Mers) Coronavirus (pdb code 4pt5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Plpro From Middle East Respiratory Syndrome (Mers) Coronavirus, PDB code: 4pt5:

Zinc binding site 1 out of 1 in 4pt5

Go back to Zinc Binding Sites List in 4pt5
Zinc binding site 1 out of 1 in the Crystal Structure of Plpro From Middle East Respiratory Syndrome (Mers) Coronavirus


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Plpro From Middle East Respiratory Syndrome (Mers) Coronavirus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:78.1
occ:1.00
SG A:CYS230 2.2 76.8 1.0
SG A:CYS228 2.3 73.1 1.0
SG A:CYS193 2.3 77.1 1.0
SG A:CYS196 2.3 73.4 1.0
CB A:CYS230 3.2 79.4 1.0
CB A:CYS193 3.3 77.1 1.0
CB A:CYS196 3.3 77.5 1.0
CB A:CYS228 3.4 72.8 1.0
N A:CYS196 3.8 82.4 1.0
N A:CYS230 3.9 78.8 1.0
CA A:CYS230 4.2 78.6 1.0
CA A:CYS196 4.2 79.9 1.0
CB A:VAL195 4.4 83.3 1.0
CA A:CYS193 4.7 77.8 1.0
CA A:CYS228 4.8 73.7 1.0
N A:GLN229 4.8 77.6 1.0
C A:VAL195 4.8 83.6 1.0
O A:HOH518 4.9 48.7 1.0
N A:VAL195 4.9 83.4 1.0
CA A:VAL195 5.0 83.0 1.0
C A:CYS230 5.0 80.0 1.0

Reference:

H.Lei, B.D.Santarsiero, H.Lee, M.E.Johnson. Crystal Structure of Plpro From Middle East Respiratory Syndrome (Mers) Coronavirus To Be Published.
Page generated: Wed Dec 16 05:41:30 2020

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