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Zinc in PDB 4owf: Crystal Structure of the Nemo Cozi in Complex with Hoip NZF1 Domain

Protein crystallography data

The structure of Crystal Structure of the Nemo Cozi in Complex with Hoip NZF1 Domain, PDB code: 4owf was solved by S.Rahighi, H.Fujita, M.Kawasaki, R.Kato, K.Iwai, S.Wakatsuki, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.96 / 2.00
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 81.410, 81.410, 74.501, 90.00, 90.00, 120.00
R / Rfree (%) 25.9 / 31.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Nemo Cozi in Complex with Hoip NZF1 Domain (pdb code 4owf). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Nemo Cozi in Complex with Hoip NZF1 Domain, PDB code: 4owf:

Zinc binding site 1 out of 1 in 4owf

Go back to Zinc Binding Sites List in 4owf
Zinc binding site 1 out of 1 in the Crystal Structure of the Nemo Cozi in Complex with Hoip NZF1 Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Nemo Cozi in Complex with Hoip NZF1 Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Zn401

b:20.6
occ:1.00
SG G:CYS373 2.3 20.7 1.0
SG G:CYS370 2.3 18.2 1.0
SG G:CYS356 2.3 21.4 1.0
SG G:CYS359 2.3 19.2 1.0
CB G:CYS370 3.1 19.3 1.0
CB G:CYS356 3.1 24.9 1.0
CB G:CYS359 3.3 21.1 1.0
CB G:CYS373 3.4 20.8 1.0
N G:CYS373 3.8 21.8 1.0
N G:CYS359 3.9 22.7 1.0
CA G:CYS373 4.1 21.2 1.0
CA G:CYS359 4.1 21.2 1.0
CA G:CYS370 4.6 20.1 1.0
CA G:CYS356 4.6 23.2 1.0
CB G:PHE361 4.7 21.7 1.0
C G:CYS373 4.8 20.8 1.0
C G:CYS359 4.8 21.4 1.0
N G:GLU374 4.9 22.9 1.0
N G:THR360 4.9 21.5 1.0
C G:ILE372 4.9 22.1 1.0
O G:HOH510 4.9 25.2 1.0
CB G:ILE372 4.9 23.7 1.0
CB G:SER358 4.9 23.2 1.0
C G:SER358 4.9 24.2 1.0
N G:PHE361 5.0 21.4 1.0

Reference:

H.Fujita, S.Rahighi, M.Akita, R.Kato, Y.Sasaki, S.Wakatsuki, K.Iwai. Mechanism Underlying I Kappa B Kinase Activation Mediated By the Linear Ubiquitin Chain Assembly Complex. Mol.Cell.Biol. V. 34 1322 2014.
ISSN: ESSN 1098-5549
PubMed: 24469399
DOI: 10.1128/MCB.01538-13
Page generated: Wed Dec 16 05:39:42 2020

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