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Zinc in PDB 4ojl: Crystal Structure of Putative Tailspike Protein (TSP1, ORF210) From Escherichia Coli O157:H7 Bacteriohage CBA120 in Complex with Glucose

Protein crystallography data

The structure of Crystal Structure of Putative Tailspike Protein (TSP1, ORF210) From Escherichia Coli O157:H7 Bacteriohage CBA120 in Complex with Glucose, PDB code: 4ojl was solved by C.Chen, O.Herzberg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.80 / 2.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 123.448, 152.442, 171.852, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / 21.1

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Putative Tailspike Protein (TSP1, ORF210) From Escherichia Coli O157:H7 Bacteriohage CBA120 in Complex with Glucose (pdb code 4ojl). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Putative Tailspike Protein (TSP1, ORF210) From Escherichia Coli O157:H7 Bacteriohage CBA120 in Complex with Glucose, PDB code: 4ojl:

Zinc binding site 1 out of 1 in 4ojl

Go back to Zinc Binding Sites List in 4ojl
Zinc binding site 1 out of 1 in the Crystal Structure of Putative Tailspike Protein (TSP1, ORF210) From Escherichia Coli O157:H7 Bacteriohage CBA120 in Complex with Glucose


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Putative Tailspike Protein (TSP1, ORF210) From Escherichia Coli O157:H7 Bacteriohage CBA120 in Complex with Glucose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn802

b:38.4
occ:0.52
ND1 C:HIS25 2.8 27.0 1.0
ND1 B:HIS25 2.8 28.8 1.0
ND1 A:HIS25 2.8 26.4 1.0
O A:HOH1614 3.5 42.5 1.0
CG C:HIS25 3.6 28.2 1.0
CB C:HIS25 3.6 24.6 1.0
CG B:HIS25 3.7 29.4 1.0
CG A:HIS25 3.7 30.4 1.0
CA C:HIS25 3.7 26.3 1.0
CB A:HIS25 3.8 26.3 1.0
CE1 B:HIS25 3.8 27.9 1.0
CA A:HIS25 3.8 26.3 1.0
CB B:HIS25 3.8 25.5 1.0
CE1 A:HIS25 3.8 28.5 1.0
CE1 C:HIS25 3.8 30.9 1.0
CA B:HIS25 3.9 26.9 1.0
N C:HIS25 4.5 23.5 1.0
N A:HIS25 4.6 26.9 1.0
N B:HIS25 4.7 24.0 1.0
O B:HOH1684 4.7 44.9 1.0
CD2 C:HIS25 4.8 25.6 1.0
O A:HIS25 4.8 27.5 1.0
C A:HIS25 4.8 29.5 1.0
CD2 B:HIS25 4.8 28.8 1.0
NE2 B:HIS25 4.9 27.1 1.0
C C:HIS25 4.9 25.0 1.0
CD2 A:HIS25 4.9 28.3 1.0
NE2 C:HIS25 4.9 30.8 1.0
NE2 A:HIS25 4.9 29.0 1.0
O C:HIS25 4.9 23.6 1.0
O A:ARG24 4.9 26.9 1.0

Reference:

C.Chen, P.Bales, J.Greenfield, R.D.Heselpoth, D.C.Nelson, O.Herzberg. Crystal Structure of ORF210 From E. Coli O157:H1 Phage CBA120 (TSP1), A Putative Tailspike Protein. Plos One V. 9 93156 2014.
ISSN: ESSN 1932-6203
PubMed: 24671238
DOI: 10.1371/JOURNAL.PONE.0093156
Page generated: Wed Dec 16 05:39:06 2020

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