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Zinc in PDB 4mtr: Zn-Bound GLOA2

Enzymatic activity of Zn-Bound GLOA2

All present enzymatic activity of Zn-Bound GLOA2:
4.4.1.5;

Protein crystallography data

The structure of Zn-Bound GLOA2, PDB code: 4mtr was solved by R.Bythell-Douglas, C.S.Bond, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.69 / 1.83
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 40.788, 73.503, 80.011, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 21.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Zn-Bound GLOA2 (pdb code 4mtr). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Zn-Bound GLOA2, PDB code: 4mtr:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 4mtr

Go back to Zinc Binding Sites List in 4mtr
Zinc binding site 1 out of 2 in the Zn-Bound GLOA2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Zn-Bound GLOA2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn203

b:21.4
occ:1.00
O A:HOH301 1.9 25.6 1.0
NE2 A:HIS5 2.1 19.2 1.0
NE2 B:HIS74 2.1 15.7 1.0
OE1 B:GLU122 2.2 24.6 1.0
OE1 A:GLU56 2.2 19.0 1.0
CE1 B:HIS74 3.0 15.3 1.0
CE1 A:HIS5 3.1 19.5 1.0
CD2 A:HIS5 3.1 19.6 1.0
CD2 B:HIS74 3.1 16.5 1.0
CD B:GLU122 3.2 35.3 1.0
CD A:GLU56 3.3 18.9 1.0
OE2 B:GLU122 3.6 39.4 1.0
OE2 A:GLU56 3.7 18.4 1.0
CB B:ALA76 4.2 15.0 1.0
ND1 B:HIS74 4.2 15.8 1.0
CG A:HIS5 4.2 18.4 1.0
ND1 A:HIS5 4.2 20.9 1.0
CG B:HIS74 4.2 15.3 1.0
CB A:MET7 4.4 14.2 1.0
CG B:GLU122 4.5 23.9 1.0
CG A:GLU56 4.6 12.2 1.0
CB A:GLU56 4.7 11.4 1.0
CB B:GLU122 4.7 19.9 1.0
CE2 A:PHE43 4.8 24.3 1.0
CZ A:PHE43 4.9 22.0 1.0
CG A:MET7 4.9 16.3 1.0

Zinc binding site 2 out of 2 in 4mtr

Go back to Zinc Binding Sites List in 4mtr
Zinc binding site 2 out of 2 in the Zn-Bound GLOA2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Zn-Bound GLOA2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn204

b:25.2
occ:1.00
NE2 B:HIS5 2.0 19.4 1.0
O B:HOH601 2.1 29.7 1.0
NE2 A:HIS74 2.1 20.7 1.0
OE1 B:GLU56 2.2 25.3 1.0
OE1 A:GLU122 2.3 31.9 1.0
CD2 B:HIS5 3.0 20.5 1.0
CE1 B:HIS5 3.1 19.2 1.0
CE1 A:HIS74 3.1 20.1 1.0
CD2 A:HIS74 3.2 20.9 1.0
CD A:GLU122 3.3 35.6 1.0
CD B:GLU56 3.3 27.4 1.0
OE2 B:GLU56 3.7 32.5 1.0
OE2 A:GLU122 3.7 45.7 1.0
CG B:HIS5 4.1 19.5 1.0
ND1 B:HIS5 4.2 20.8 1.0
ND1 A:HIS74 4.2 20.4 1.0
CB A:ALA76 4.2 17.7 1.0
CG A:HIS74 4.3 18.8 1.0
CB B:MET7 4.5 13.5 1.0
CG A:GLU122 4.5 23.8 1.0
CG B:GLU56 4.6 18.6 1.0
CB B:GLU56 4.7 17.6 1.0
CB A:GLU122 4.8 20.4 1.0
CZ B:PHE43 4.8 25.3 1.0
CG B:MET7 4.9 17.2 1.0
O B:HOH635 4.9 42.8 1.0

Reference:

R Bythell-Douglas, G.R.Flematti, M.Challenor, U.Suttisansanee, J.F.Honek, C.S.Bond. Zn-Bound GLOA2 To Be Published.
Page generated: Wed Dec 16 05:35:58 2020

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