Zinc in PDB 4le6: Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes

Enzymatic activity of Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes

All present enzymatic activity of Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes:
3.1.8.1;

Protein crystallography data

The structure of Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes, PDB code: 4le6 was solved by G.Gotthard, J.Hiblot, E.Chabriere, M.Elias, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.80 / 2.10
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 109.910, 63.850, 221.260, 90.00, 101.85, 90.00
R / Rfree (%) 17.3 / 21

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes (pdb code 4le6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 10 binding sites of Zinc where determined in the Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes, PDB code: 4le6:
Jump to Zinc binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Zinc binding site 1 out of 10 in 4le6

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Zinc binding site 1 out of 10 in the Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn405

b:24.9
occ:1.00
NE2 A:HIS226 2.0 27.2 1.0
ND1 A:HIS141 2.1 25.5 1.0
O A:HOH700 2.1 14.5 1.0
NE2 A:HIS139 2.2 22.9 1.0
OD2 A:ASP247 2.2 20.6 1.0
CD2 A:HIS226 2.9 25.4 1.0
O A:HOH825 2.9 50.4 1.0
CE1 A:HIS141 2.9 27.9 1.0
CE1 A:HIS226 3.0 24.9 1.0
CD2 A:HIS139 3.0 22.2 1.0
HE1 A:HIS141 3.1 33.5 1.0
HD2 A:HIS226 3.1 30.5 1.0
CG A:HIS141 3.1 23.9 1.0
HD2 A:HIS139 3.1 26.7 1.0
ZN A:ZN406 3.1 20.5 1.0
HB2 A:HIS141 3.2 27.7 1.0
HE1 A:HIS226 3.2 29.8 1.0
CE1 A:HIS139 3.2 26.1 1.0
CG A:ASP247 3.3 23.0 1.0
HE1 A:HIS139 3.5 31.3 1.0
CB A:HIS141 3.5 23.1 1.0
HB3 A:HIS141 3.6 27.7 1.0
HB2 A:ASP247 3.7 25.0 1.0
HD2 A:HIS144 3.8 21.1 1.0
NE2 A:HIS144 3.9 19.4 1.0
HB3 A:ASP247 3.9 25.0 1.0
CB A:ASP247 3.9 20.8 1.0
CD2 A:HIS144 4.1 17.6 1.0
ND1 A:HIS226 4.1 28.7 1.0
CG A:HIS226 4.1 27.7 1.0
NE2 A:HIS141 4.1 28.8 1.0
CD2 A:HIS141 4.2 25.7 1.0
CG A:HIS139 4.2 20.0 1.0
OD1 A:ASP247 4.3 20.0 1.0
ND1 A:HIS139 4.3 22.4 1.0
OD1 A:ASP143 4.4 22.3 1.0
H12 A:GOL402 4.5 40.1 0.5
OD2 A:ASP143 4.7 18.5 1.0
HG23 A:THR227 4.7 34.6 1.0
HD1 A:HIS226 4.9 34.4 1.0
HE2 A:HIS141 4.9 34.5 1.0
NE2 A:HIS294 4.9 21.6 1.0
CE1 A:HIS144 4.9 23.4 1.0
H A:HIS141 4.9 25.6 1.0
HD11 A:LEU250 4.9 63.9 1.0
CG A:ASP143 5.0 23.9 1.0
H11 A:GOL402 5.0 40.1 0.5

Zinc binding site 2 out of 10 in 4le6

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Zinc binding site 2 out of 10 in the Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes


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Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn406

b:20.5
occ:1.00
O A:HOH700 1.8 14.5 1.0
NE2 A:HIS294 2.1 21.6 1.0
NE2 A:HIS144 2.1 19.4 1.0
OD2 A:ASP247 2.1 20.6 1.0
OD2 A:ASP143 2.2 18.5 1.0
CG A:ASP247 2.9 23.0 1.0
CE1 A:HIS294 2.9 21.4 1.0
CD2 A:HIS144 2.9 17.6 1.0
OD1 A:ASP247 3.0 20.0 1.0
HE1 A:HIS294 3.1 25.7 1.0
HD2 A:HIS144 3.1 21.1 1.0
CG A:ASP143 3.1 23.9 1.0
CE1 A:HIS144 3.1 23.4 1.0
CD2 A:HIS294 3.1 23.8 1.0
ZN A:ZN405 3.1 24.9 1.0
HE1 A:HIS144 3.4 28.0 1.0
HD2 A:HIS294 3.4 28.6 1.0
OD1 A:ASP143 3.4 22.3 1.0
HE1 A:HIS139 3.6 31.3 1.0
O A:HOH825 3.7 50.4 1.0
NE2 A:HIS139 4.0 22.9 1.0
ND1 A:HIS294 4.1 24.4 1.0
CE1 A:HIS139 4.1 26.1 1.0
CG A:HIS144 4.1 20.7 1.0
ND1 A:HIS144 4.2 24.3 1.0
CG A:HIS294 4.2 25.6 1.0
CB A:ASP247 4.4 20.8 1.0
HD11 A:LEU250 4.5 63.9 1.0
CB A:ASP143 4.5 24.2 1.0
HB2 A:ASP143 4.5 29.0 1.0
HB2 A:HIS141 4.5 27.7 1.0
HB3 A:HIS141 4.6 27.7 1.0
HB3 A:ASP247 4.6 25.0 1.0
NE2 A:HIS226 4.6 27.2 1.0
HB1 A:ALA293 4.7 25.4 1.0
HO1 A:GOL402 4.7 39.2 0.5
HB3 A:ALA293 4.7 25.4 1.0
HB2 A:ASP247 4.7 25.0 1.0
ND1 A:HIS141 4.8 25.5 1.0
H11 A:GOL402 4.8 40.1 0.5
HD12 A:LEU250 4.8 63.9 1.0
HD1 A:HIS294 4.9 29.2 1.0
CB A:HIS141 5.0 23.1 1.0
HD1 A:HIS144 5.0 29.2 1.0

Zinc binding site 3 out of 10 in 4le6

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Zinc binding site 3 out of 10 in the Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn405

b:34.2
occ:1.00
NE2 B:HIS144 1.9 29.0 1.0
OD2 B:ASP247 2.1 34.8 1.0
NE2 B:HIS294 2.1 29.6 1.0
O B:HOH600 2.2 27.9 1.0
OD2 B:ASP143 2.4 32.2 1.0
CE1 B:HIS144 2.8 29.9 1.0
CG B:ASP247 2.9 35.8 1.0
HE1 B:HIS144 2.9 35.9 1.0
CD2 B:HIS144 3.0 32.1 1.0
CE1 B:HIS294 3.0 29.1 1.0
OD1 B:ASP247 3.0 35.3 1.0
CD2 B:HIS294 3.1 25.8 1.0
HE1 B:HIS294 3.1 34.9 1.0
ZN B:ZN406 3.2 31.7 1.0
HD2 B:HIS144 3.2 38.5 1.0
CG B:ASP143 3.2 33.7 1.0
HD2 B:HIS294 3.4 31.0 1.0
OD1 B:ASP143 3.5 33.8 1.0
O B:HOH663 3.6 50.0 1.0
HE1 B:HIS139 3.6 44.4 1.0
NE2 B:HIS139 3.9 34.1 1.0
ND1 B:HIS144 3.9 32.7 1.0
CE1 B:HIS139 4.1 37.0 1.0
CG B:HIS144 4.1 32.7 1.0
HO3 B:GOL401 4.1 49.0 0.4
ND1 B:HIS294 4.2 26.5 1.0
CG B:HIS294 4.2 26.7 1.0
CB B:ASP247 4.3 37.4 1.0
O3 B:GOL401 4.4 40.9 0.4
NE2 B:HIS226 4.5 34.0 1.0
H31 B:GOL401 4.5 44.7 0.2
HB3 B:ASP247 4.5 44.8 1.0
HB2 B:HIS141 4.6 34.7 1.0
CB B:ASP143 4.6 30.4 1.0
HB2 B:ASP143 4.6 36.5 1.0
HB3 B:ALA293 4.7 31.4 1.0
HB3 B:HIS141 4.7 34.7 1.0
HB2 B:ASP247 4.7 44.8 1.0
HD1 B:HIS144 4.7 39.2 1.0
HB1 B:ALA293 4.7 31.4 1.0
HO3 B:GOL401 4.8 46.6 0.2
HD21 B:LEU250 4.9 71.7 1.0
ND1 B:HIS141 4.9 27.0 1.0
HD1 B:HIS294 4.9 31.8 1.0
HG13 B:VAL89 4.9 32.6 1.0

Zinc binding site 4 out of 10 in 4le6

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Zinc binding site 4 out of 10 in the Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn406

b:31.7
occ:1.00
NE2 B:HIS226 1.9 34.0 1.0
ND1 B:HIS141 2.1 27.0 1.0
NE2 B:HIS139 2.1 34.1 1.0
O B:HOH600 2.2 27.9 1.0
OD2 B:ASP247 2.4 34.8 1.0
CD2 B:HIS226 2.8 29.8 1.0
CE1 B:HIS226 2.9 34.7 1.0
O B:HOH663 2.9 50.0 1.0
CD2 B:HIS139 3.0 32.0 1.0
HD2 B:HIS226 3.0 35.8 1.0
HD2 B:HIS139 3.0 38.4 1.0
CE1 B:HIS141 3.0 31.1 1.0
HB2 B:HIS141 3.1 34.7 1.0
HE1 B:HIS141 3.2 37.3 1.0
ZN B:ZN405 3.2 34.2 1.0
CG B:HIS141 3.2 27.0 1.0
HE1 B:HIS226 3.2 41.6 1.0
CE1 B:HIS139 3.2 37.0 1.0
CG B:ASP247 3.4 35.8 1.0
HE1 B:HIS139 3.5 44.4 1.0
CB B:HIS141 3.5 28.9 1.0
HB3 B:HIS141 3.6 34.7 1.0
HB2 B:ASP247 3.7 44.8 1.0
NE2 B:HIS144 3.8 29.0 1.0
HD2 B:HIS144 3.9 38.5 1.0
HB3 B:ASP247 3.9 44.8 1.0
CB B:ASP247 3.9 37.4 1.0
H31 B:GOL401 4.0 44.7 0.2
CG B:HIS226 4.0 30.7 1.0
ND1 B:HIS226 4.0 32.1 1.0
CD2 B:HIS144 4.1 32.1 1.0
CG B:HIS139 4.2 33.7 1.0
NE2 B:HIS141 4.2 29.9 1.0
H11 B:GOL401 4.2 43.2 0.4
ND1 B:HIS139 4.2 36.2 1.0
CD2 B:HIS141 4.3 27.1 1.0
H12 B:GOL401 4.3 43.2 0.4
OD1 B:ASP247 4.3 35.3 1.0
OD1 B:ASP143 4.4 33.8 1.0
HG23 B:THR227 4.7 44.2 1.0
CE1 B:HIS144 4.7 29.9 1.0
HD1 B:HIS226 4.8 38.5 1.0
OD2 B:ASP143 4.8 32.2 1.0
C1 B:GOL401 4.8 36.0 0.4
HO2 B:GOL401 4.8 42.0 0.2
H B:HIS141 4.9 35.0 1.0
HD21 B:LEU250 4.9 71.7 1.0
HE2 B:HIS141 4.9 35.9 1.0
NE2 B:HIS294 5.0 29.6 1.0
C3 B:GOL401 5.0 37.2 0.2
HD2 B:HIS230 5.0 39.2 1.0

Zinc binding site 5 out of 10 in 4le6

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Zinc binding site 5 out of 10 in the Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 5 of Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn404

b:43.3
occ:1.00
O C:HOH635 1.8 30.9 1.0
NE2 C:HIS226 1.9 49.2 1.0
ND1 C:HIS141 2.1 45.6 1.0
NE2 C:HIS139 2.2 46.4 1.0
OD2 C:ASP247 2.4 46.3 1.0
CE1 C:HIS226 2.8 49.1 1.0
CD2 C:HIS226 2.9 50.8 1.0
HE1 C:HIS226 3.0 59.0 1.0
CE1 C:HIS141 3.1 47.2 1.0
HB2 C:HIS141 3.1 56.0 1.0
O C:HOH634 3.1 54.6 1.0
CG C:HIS141 3.1 46.4 1.0
ZN C:ZN405 3.2 42.8 1.0
CD2 C:HIS139 3.2 46.1 1.0
HD2 C:HIS226 3.2 61.0 1.0
HE1 C:HIS141 3.2 56.7 1.0
CE1 C:HIS139 3.2 45.2 1.0
HD2 C:HIS139 3.3 55.4 1.0
CG C:ASP247 3.3 45.4 1.0
HE1 C:HIS139 3.4 54.2 1.0
CB C:HIS141 3.5 46.7 1.0
HB3 C:HIS141 3.5 56.0 1.0
HB2 C:ASP247 3.5 56.1 1.0
HB3 C:ASP247 3.7 56.1 1.0
CB C:ASP247 3.8 46.8 1.0
NE2 C:HIS144 3.8 45.9 1.0
ND1 C:HIS226 4.0 49.6 1.0
HD2 C:HIS144 4.0 52.5 1.0
CG C:HIS226 4.0 51.2 1.0
CD2 C:HIS144 4.2 43.7 1.0
NE2 C:HIS141 4.2 51.1 1.0
CD2 C:HIS141 4.2 51.6 1.0
OD1 C:ASP143 4.3 42.7 1.0
CG C:HIS139 4.3 46.0 1.0
ND1 C:HIS139 4.3 45.4 1.0
OD1 C:ASP247 4.4 44.5 1.0
OD2 C:ASP143 4.5 40.9 1.0
HD21 C:LEU250 4.7 89.1 1.0
HD1 C:HIS226 4.7 59.5 1.0
CE1 C:HIS144 4.7 42.4 1.0
HG23 C:THR227 4.8 63.7 1.0
CG C:ASP143 4.8 41.8 1.0
NE2 C:HIS294 4.9 48.0 1.0
H C:HIS141 4.9 57.9 1.0
HD2 C:HIS230 4.9 63.9 1.0
CA C:HIS141 4.9 49.6 1.0
HE2 C:HIS141 5.0 61.4 1.0

Zinc binding site 6 out of 10 in 4le6

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Zinc binding site 6 out of 10 in the Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 6 of Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Zn405

b:42.8
occ:1.00
OD2 C:ASP247 1.9 46.3 1.0
OD2 C:ASP143 2.0 40.9 1.0
NE2 C:HIS294 2.0 48.0 1.0
NE2 C:HIS144 2.1 45.9 1.0
O C:HOH635 2.5 30.9 1.0
CG C:ASP247 2.8 45.4 1.0
CE1 C:HIS294 3.0 44.8 1.0
CG C:ASP143 3.0 41.8 1.0
CE1 C:HIS144 3.1 42.4 1.0
CD2 C:HIS294 3.1 44.7 1.0
CD2 C:HIS144 3.1 43.7 1.0
OD1 C:ASP247 3.1 44.5 1.0
HE1 C:HIS294 3.1 53.8 1.0
ZN C:ZN404 3.2 43.3 1.0
HE1 C:HIS144 3.3 50.9 1.0
HD2 C:HIS144 3.3 52.5 1.0
HD2 C:HIS294 3.3 53.6 1.0
OD1 C:ASP143 3.4 42.7 1.0
HE1 C:HIS139 3.8 54.2 1.0
O C:HOH634 4.0 54.6 1.0
NE2 C:HIS139 4.1 46.4 1.0
ND1 C:HIS294 4.1 48.1 1.0
ND1 C:HIS144 4.2 43.4 1.0
CG C:HIS294 4.2 46.9 1.0
CB C:ASP247 4.2 46.8 1.0
CG C:HIS144 4.2 45.0 1.0
CE1 C:HIS139 4.3 45.2 1.0
HB2 C:ASP143 4.3 49.5 1.0
CB C:ASP143 4.3 41.2 1.0
HB3 C:ASP247 4.3 56.1 1.0
HB2 C:HIS141 4.5 56.0 1.0
HD21 C:LEU250 4.5 89.1 1.0
NE2 C:HIS226 4.5 49.2 1.0
HB3 C:HIS141 4.6 56.0 1.0
HB2 C:ASP247 4.6 56.1 1.0
HB1 C:ALA293 4.7 48.7 1.0
HB3 C:ALA293 4.7 48.7 1.0
HD1 C:HIS294 4.9 57.7 1.0
HG13 C:VAL89 4.9 53.3 1.0
HB3 C:ASP143 4.9 49.5 1.0
ND1 C:HIS141 4.9 45.6 1.0
HD1 C:HIS144 5.0 52.0 1.0
CB C:HIS141 5.0 46.7 1.0
HD23 C:LEU250 5.0 89.1 1.0

Zinc binding site 7 out of 10 in 4le6

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Zinc binding site 7 out of 10 in the Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 7 of Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn402

b:53.2
occ:1.00
NE2 D:HIS226 1.9 63.4 1.0
NE2 D:HIS139 2.0 58.2 1.0
O D:HOH541 2.0 31.2 1.0
ND1 D:HIS141 2.2 57.2 1.0
OD2 D:ASP247 2.5 78.1 1.0
CD2 D:HIS226 2.6 65.7 1.0
HD2 D:HIS226 2.6 78.8 1.0
CD2 D:HIS139 3.0 60.0 1.0
CE1 D:HIS139 3.0 62.2 1.0
HB2 D:HIS141 3.1 65.4 1.0
CE1 D:HIS226 3.1 67.3 1.0
HD2 D:HIS139 3.1 72.0 1.0
ZN D:ZN403 3.1 56.3 1.0
CE1 D:HIS141 3.2 58.7 1.0
CG D:HIS141 3.2 56.0 1.0
O D:HOH542 3.3 53.6 1.0
HE1 D:HIS139 3.3 74.7 1.0
HE1 D:HIS141 3.3 70.4 1.0
CG D:ASP247 3.4 79.2 1.0
HB2 D:ASP247 3.5 95.8 1.0
CB D:HIS141 3.5 54.5 1.0
HE1 D:HIS226 3.5 80.8 1.0
HB3 D:HIS141 3.6 65.4 1.0
HB3 D:ASP247 3.6 95.8 1.0
CB D:ASP247 3.7 79.8 1.0
CG D:HIS226 3.9 68.6 1.0
NE2 D:HIS144 3.9 63.5 1.0
HD2 D:HIS144 4.0 76.6 1.0
ND1 D:HIS226 4.1 70.6 1.0
ND1 D:HIS139 4.1 64.6 1.0
CG D:HIS139 4.1 61.5 1.0
CD2 D:HIS144 4.2 63.9 1.0
NE2 D:HIS141 4.3 58.4 1.0
CD2 D:HIS141 4.3 56.8 1.0
OD1 D:ASP247 4.4 79.9 1.0
OD1 D:ASP143 4.4 55.7 1.0
O D:HOH543 4.4 50.5 1.0
OD2 D:ASP143 4.5 62.0 1.0
HD11 D:LEU250 4.5 99.8 1.0
HG23 D:THR227 4.7 75.3 1.0
CG D:ASP143 4.9 57.3 1.0
H D:HIS141 4.9 66.6 1.0
HD1 D:HIS139 4.9 77.5 1.0
NE2 D:HIS294 4.9 64.1 1.0
HD1 D:HIS226 4.9 84.8 1.0
CE1 D:HIS144 4.9 60.1 1.0
CA D:HIS141 5.0 53.8 1.0

Zinc binding site 8 out of 10 in 4le6

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Zinc binding site 8 out of 10 in the Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 8 of Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Zn403

b:56.3
occ:1.00
OD2 D:ASP247 1.8 78.1 1.0
OD2 D:ASP143 2.1 62.0 1.0
NE2 D:HIS144 2.1 63.5 1.0
NE2 D:HIS294 2.1 64.1 1.0
O D:HOH541 2.4 31.2 1.0
CG D:ASP247 2.7 79.2 1.0
CD2 D:HIS144 2.9 63.9 1.0
HD2 D:HIS144 3.0 76.6 1.0
CE1 D:HIS294 3.0 60.2 1.0
OD1 D:ASP247 3.0 79.9 1.0
CG D:ASP143 3.0 57.3 1.0
HE1 D:HIS294 3.1 72.2 1.0
ZN D:ZN402 3.1 53.2 1.0
CD2 D:HIS294 3.2 63.5 1.0
CE1 D:HIS144 3.2 60.1 1.0
O D:HOH543 3.3 50.5 1.0
OD1 D:ASP143 3.4 55.7 1.0
HD2 D:HIS294 3.5 76.2 1.0
HE1 D:HIS139 3.5 74.7 1.0
HE1 D:HIS144 3.5 72.1 1.0
NE2 D:HIS139 4.0 58.2 1.0
CE1 D:HIS139 4.0 62.2 1.0
CB D:ASP247 4.1 79.8 1.0
CG D:HIS144 4.1 62.9 1.0
ND1 D:HIS294 4.1 59.1 1.0
HB2 D:ASP143 4.2 62.8 1.0
ND1 D:HIS144 4.3 61.2 1.0
O D:HOH542 4.3 53.6 1.0
CG D:HIS294 4.3 61.5 1.0
CB D:ASP143 4.3 52.3 1.0
HB3 D:ASP247 4.3 95.8 1.0
HD11 D:LEU250 4.4 99.8 1.0
HB2 D:ASP247 4.4 95.8 1.0
HB2 D:HIS141 4.5 65.4 1.0
HB3 D:HIS141 4.5 65.4 1.0
NE2 D:HIS226 4.5 63.4 1.0
HD12 D:LEU250 4.6 99.8 1.0
HB3 D:ALA293 4.7 75.9 1.0
HB1 D:ALA293 4.7 75.9 1.0
CD1 D:LEU250 4.9 83.1 1.0
HB3 D:ASP143 4.9 62.8 1.0
HD1 D:HIS294 4.9 71.0 1.0
ND1 D:HIS141 4.9 57.2 1.0
HD13 D:LEU250 5.0 99.8 1.0
CB D:HIS141 5.0 54.5 1.0
HG13 D:VAL89 5.0 65.0 1.0

Zinc binding site 9 out of 10 in 4le6

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Zinc binding site 9 out of 10 in the Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 9 of Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Zn401

b:97.1
occ:1.00
HD1 E:HIS141 1.7 0.8 1.0
NE2 E:HIS139 1.8 0.7 1.0
NE2 E:HIS226 2.0 0.0 1.0
O E:HOH504 2.3 47.5 1.0
ND1 E:HIS141 2.4 0.3 1.0
OD2 E:ASP247 2.4 0.9 1.0
CE1 E:HIS139 2.6 0.3 1.0
HE1 E:HIS139 2.7 0.6 1.0
CD2 E:HIS226 2.9 0.3 1.0
CD2 E:HIS139 3.0 0.8 1.0
HB2 E:HIS141 3.0 0.3 1.0
CG E:ASP247 3.0 0.7 1.0
HD2 E:HIS226 3.0 0.3 1.0
CE1 E:HIS226 3.1 0.4 1.0
ZN E:ZN402 3.1 98.6 1.0
CG E:HIS141 3.2 0.8 1.0
HD2 E:HIS139 3.3 0.5 1.0
CE1 E:HIS141 3.3 0.3 1.0
HE1 E:HIS226 3.4 0.5 1.0
CB E:HIS141 3.4 0.9 1.0
HB3 E:HIS141 3.4 0.3 1.0
HB2 E:ASP247 3.5 0.4 1.0
HE1 E:HIS141 3.5 1.0 1.0
OD1 E:ASP247 3.7 0.1 1.0
NE2 E:HIS144 3.7 98.3 1.0
CB E:ASP247 3.8 0.3 1.0
ND1 E:HIS139 3.8 0.0 1.0
HD2 E:HIS144 3.9 0.5 1.0
O E:HOH510 3.9 43.7 1.0
CG E:HIS139 4.0 0.9 1.0
CD2 E:HIS144 4.0 99.5 1.0
HB3 E:ASP247 4.0 0.4 1.0
OD1 E:ASP143 4.1 98.5 1.0
CG E:HIS226 4.1 0.9 1.0
ND1 E:HIS226 4.2 0.9 1.0
CD2 E:HIS141 4.3 0.3 1.0
NE2 E:HIS141 4.3 0.5 1.0
HE2 E:HIS294 4.4 0.8 1.0
OD2 E:ASP143 4.4 96.8 1.0
HD1 E:HIS139 4.5 0.4 1.0
CE1 E:HIS144 4.7 98.5 1.0
CG E:ASP143 4.7 97.4 1.0
HG23 E:THR227 4.7 0.7 1.0
H E:HIS141 4.8 0.1 1.0
HE1 E:HIS230 4.8 0.4 1.0
CA E:HIS141 4.9 0.8 1.0
H E:ASP247 4.9 0.9 1.0
HD1 E:HIS230 4.9 0.0 1.0
HD1 E:HIS226 5.0 0.1 1.0

Zinc binding site 10 out of 10 in 4le6

Go back to Zinc Binding Sites List in 4le6
Zinc binding site 10 out of 10 in the Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 10 of Crystal Structure of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Zn402

b:98.6
occ:1.00
HE2 E:HIS294 1.6 0.8 1.0
NE2 E:HIS144 1.8 98.3 1.0
OD2 E:ASP143 1.8 96.8 1.0
OD2 E:ASP247 1.9 0.9 1.0
NE2 E:HIS294 2.4 0.6 1.0
O E:HOH510 2.5 43.7 1.0
CD2 E:HIS144 2.7 99.5 1.0
CG E:ASP143 2.7 97.4 1.0
HD2 E:HIS144 2.8 0.5 1.0
CG E:ASP247 2.9 0.7 1.0
CE1 E:HIS144 3.0 98.5 1.0
OD1 E:ASP143 3.1 98.5 1.0
ZN E:ZN401 3.1 97.1 1.0
HD2 E:HIS294 3.2 0.1 1.0
CD2 E:HIS294 3.2 0.4 1.0
OD1 E:ASP247 3.2 0.1 1.0
HE1 E:HIS139 3.2 0.6 1.0
HE1 E:HIS144 3.3 0.2 1.0
CE1 E:HIS294 3.5 0.7 1.0
O E:HOH504 3.6 47.5 1.0
HE1 E:HIS294 3.8 0.6 1.0
CG E:HIS144 3.9 99.8 1.0
CE1 E:HIS139 3.9 0.3 1.0
ND1 E:HIS144 4.0 98.8 1.0
HB2 E:ASP143 4.0 0.9 1.0
CB E:ASP143 4.0 96.5 1.0
NE2 E:HIS139 4.1 0.7 1.0
CB E:ASP247 4.2 0.3 1.0
HD1 E:HIS141 4.2 0.8 1.0
HB3 E:ASP247 4.3 0.4 1.0
HB2 E:HIS141 4.4 0.3 1.0
CG E:HIS294 4.4 0.3 1.0
HG13 E:VAL89 4.4 0.1 1.0
HB3 E:HIS141 4.5 0.3 1.0
ND1 E:HIS294 4.6 0.0 1.0
O E:ASP143 4.6 96.4 1.0
HB3 E:ASP143 4.6 0.9 1.0
HB2 E:ASP247 4.7 0.4 1.0
C E:ASP143 4.7 97.7 1.0
H E:ASP143 4.8 0.7 1.0
NE2 E:HIS226 4.8 0.0 1.0
HD1 E:HIS144 4.8 0.5 1.0
CA E:ASP143 4.9 97.3 1.0
CB E:HIS141 4.9 0.9 1.0

Reference:

G.Gotthard, J.Hiblot, D.Gonzalez, M.Elias, E.Chabriere. Structural and Enzymatic Characterization of the Phosphotriesterase OPHC2 From Pseudomonas Pseudoalcaligenes. Plos One V. 8 77995 2013.
ISSN: ESSN 1932-6203
PubMed: 24223749
DOI: 10.1371/JOURNAL.PONE.0077995
Page generated: Wed Dec 16 05:31:58 2020

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