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Zinc in PDB 4k1g: Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair
Enzymatic activity of Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair
All present enzymatic activity of Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair:
3.1.21.2;
3.1.21.2;
Protein crystallography data
The structure of Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair, PDB code: 4k1g
was solved by
S.Morera,
A.Vigouroux,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 40.00 / 1.90 |
| Space group | C 2 2 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 117.950, 136.660, 112.460, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 17.6 / 21.2 |
Zinc Binding Sites:
The binding sites of Zinc atom in the Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair
(pdb code 4k1g). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 5 binding sites of Zinc where determined in the Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair, PDB code: 4k1g:
Jump to Zinc binding site number: 1; 2; 3; 4; 5;
In total 5 binding sites of Zinc where determined in the Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair, PDB code: 4k1g:
Jump to Zinc binding site number: 1; 2; 3; 4; 5;
Zinc binding site 1 out of 5 in 4k1g
Go back to
Zinc Binding Sites List in 4k1g
Zinc binding site 1 out
of 5 in the Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair within 5.0Å range:
|
Zinc binding site 2 out of 5 in 4k1g
Go back to
Zinc Binding Sites List in 4k1g
Zinc binding site 2 out
of 5 in the Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair within 5.0Å range:
|
Zinc binding site 3 out of 5 in 4k1g
Go back to
Zinc Binding Sites List in 4k1g
Zinc binding site 3 out
of 5 in the Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 3 of Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair within 5.0Å range:
|
Zinc binding site 4 out of 5 in 4k1g
Go back to
Zinc Binding Sites List in 4k1g
Zinc binding site 4 out
of 5 in the Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 4 of Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair within 5.0Å range:
|
Zinc binding site 5 out of 5 in 4k1g
Go back to
Zinc Binding Sites List in 4k1g
Zinc binding site 5 out
of 5 in the Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 5 of Structure of E. Coli Nfo(Endo IV)-H69A Mutant Bound to A Cleaved Dna Duplex Containing A Alphada:T Basepair within 5.0Å range:
|
Reference:
A.Mazouzi,
A.Vigouroux,
B.Aikeshev,
P.J.Brooks,
M.K.Saparbaev,
S.Morera,
A.A.Ishchenko.
Insight Into Mechanisms of 3'-5' Exonuclease Activity and Removal of Bulky 8,5'-Cyclopurine Adducts By Apurinic/Apyrimidinic Endonucleases. Proc.Natl.Acad.Sci.Usa V. 110 E3071 2013.
ISSN: ISSN 0027-8424
PubMed: 23898172
DOI: 10.1073/PNAS.1305281110
Page generated: Wed Dec 16 05:27:26 2020
ISSN: ISSN 0027-8424
PubMed: 23898172
DOI: 10.1073/PNAS.1305281110
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