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Zinc in PDB 4iuw: Crystal Structure of Pepo From Lactobacillus Rhamnosis HN001 (DR20)

Protein crystallography data

The structure of Crystal Structure of Pepo From Lactobacillus Rhamnosis HN001 (DR20), PDB code: 4iuw was solved by B.F.Anderson, K.M.Knapp, R.Holland, G.E.Norris, C.Christensson, H.Bratt, L.J.Collins, T.Coolbear, M.W.Lubbers, P.W.O.Toole, J.R.Reid, G.B.Jameson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.24 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.387, 83.756, 143.828, 90.00, 90.00, 90.00
R / Rfree (%) 16.3 / 22.1

Other elements in 4iuw:

The structure of Crystal Structure of Pepo From Lactobacillus Rhamnosis HN001 (DR20) also contains other interesting chemical elements:

Sodium (Na) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Pepo From Lactobacillus Rhamnosis HN001 (DR20) (pdb code 4iuw). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Pepo From Lactobacillus Rhamnosis HN001 (DR20), PDB code: 4iuw:

Zinc binding site 1 out of 1 in 4iuw

Go back to Zinc Binding Sites List in 4iuw
Zinc binding site 1 out of 1 in the Crystal Structure of Pepo From Lactobacillus Rhamnosis HN001 (DR20)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Pepo From Lactobacillus Rhamnosis HN001 (DR20) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn701

b:14.6
occ:1.00
O3 A:CIT702 1.9 12.9 1.0
OE1 A:GLU537 2.0 11.6 1.0
NE2 A:HIS477 2.0 13.0 1.0
NE2 A:HIS481 2.2 13.6 1.0
C5 A:CIT702 2.6 15.6 1.0
CD A:GLU537 2.8 12.4 1.0
O4 A:CIT702 2.8 15.0 1.0
OE2 A:GLU537 3.0 11.9 1.0
CD2 A:HIS477 3.0 12.3 1.0
CE1 A:HIS477 3.0 13.2 1.0
CD2 A:HIS481 3.1 14.5 1.0
CE1 A:HIS481 3.2 14.7 1.0
O6 A:CIT702 3.6 19.7 1.0
NE2 A:HIS590 3.9 13.9 1.0
C4 A:CIT702 4.0 15.5 1.0
O A:HOH827 4.1 14.7 1.0
ND1 A:HIS477 4.1 12.2 1.0
CG A:GLU537 4.2 12.3 1.0
CG A:HIS477 4.2 13.8 1.0
CG A:HIS481 4.3 13.7 1.0
ND1 A:HIS481 4.3 14.5 1.0
C6 A:CIT702 4.4 18.1 1.0
CD2 A:HIS590 4.4 14.7 1.0
OE1 A:GLU478 4.6 11.3 1.0
CB A:ALA540 4.7 10.2 1.0
CB A:GLU537 4.7 12.3 1.0
C3 A:CIT702 4.7 18.3 1.0
OE2 A:GLU478 4.8 11.7 1.0
CA A:GLU537 4.8 12.7 1.0
NH2 A:ARG596 5.0 13.3 1.0

Reference:

B.F.Anderson, K.M.Knapp, R.Holland, G.E.Norris, C.Christensson, H.Bratt, L.J.Collins, T.Coolbear, M.W.Lubbers, P.W.O Toole, J.R.Reid, G.B.Jameson. Crystal Structure of Pepo From Lactobacillus Rhamnosis HN001 (DR20) To Be Published.
Page generated: Sun Oct 27 00:56:25 2024

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