Atomistry » Zinc » PDB 4g2y-4gg9 » 4g4n
Atomistry »
  Zinc »
    PDB 4g2y-4gg9 »
      4g4n »

Zinc in PDB 4g4n: Mutm Containing M77A Mutation Bound to Undamaged Dna

Enzymatic activity of Mutm Containing M77A Mutation Bound to Undamaged Dna

All present enzymatic activity of Mutm Containing M77A Mutation Bound to Undamaged Dna:
3.2.2.23;

Protein crystallography data

The structure of Mutm Containing M77A Mutation Bound to Undamaged Dna, PDB code: 4g4n was solved by R.J.Sung, M.Zhang, Y.Qi, G.L.Verdine, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.69 / 1.85
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.188, 93.541, 104.650, 90.00, 90.00, 90.00
R / Rfree (%) 16.9 / 19.6

Zinc Binding Sites:

The binding sites of Zinc atom in the Mutm Containing M77A Mutation Bound to Undamaged Dna (pdb code 4g4n). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Mutm Containing M77A Mutation Bound to Undamaged Dna, PDB code: 4g4n:

Zinc binding site 1 out of 1 in 4g4n

Go back to Zinc Binding Sites List in 4g4n
Zinc binding site 1 out of 1 in the Mutm Containing M77A Mutation Bound to Undamaged Dna


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Mutm Containing M77A Mutation Bound to Undamaged Dna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn300

b:17.9
occ:1.00
SG A:CYS269 2.3 16.7 1.0
SG A:CYS272 2.3 23.7 1.0
SG A:CYS252 2.3 17.2 1.0
SG A:CYS249 2.3 16.1 1.0
CB A:CYS249 3.1 16.2 1.0
CB A:CYS269 3.3 11.6 1.0
CB A:CYS272 3.4 19.1 1.0
CB A:CYS252 3.4 15.5 1.0
N A:CYS252 3.8 17.6 1.0
N A:CYS272 3.9 17.7 1.0
CE1 A:PHE182 4.1 17.4 1.0
CA A:CYS252 4.2 14.5 1.0
CA A:CYS272 4.2 16.8 1.0
O A:HOH555 4.5 32.2 1.0
CB A:ARG251 4.6 19.1 1.0
CA A:CYS249 4.6 18.8 1.0
CZ A:PHE182 4.6 17.5 1.0
CB A:ARG271 4.6 19.6 1.0
CB A:THR254 4.7 20.5 1.0
C A:ARG251 4.7 17.4 1.0
CA A:CYS269 4.7 14.4 1.0
C A:CYS252 4.8 18.4 1.0
N A:GLY253 4.8 18.4 1.0
C A:ARG271 4.9 19.0 1.0
OG1 A:THR254 5.0 19.5 1.0
N A:THR254 5.0 17.7 1.0
N A:ARG251 5.0 18.3 1.0

Reference:

R.J.Sung, M.Zhang, Y.Qi, G.L.Verdine. Structural and Biochemical Analysis of Dna Helix Invasion By the Bacterial 8-Oxoguanine Dna Glycosylase Mutm. J.Biol.Chem. V. 288 10012 2013.
ISSN: ISSN 0021-9258
PubMed: 23404556
DOI: 10.1074/JBC.M112.415612
Page generated: Sat Oct 26 23:07:25 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy