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Zinc in PDB 4fz8: Crystal Structure of C11 Fab, An Adcc Mediating Anti-Hiv-1 Antibody.

Protein crystallography data

The structure of Crystal Structure of C11 Fab, An Adcc Mediating Anti-Hiv-1 Antibody., PDB code: 4fz8 was solved by X.Wu, W.D.Tolbert, M.Pazgier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.35 / 2.66
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 134.547, 56.011, 70.708, 90.00, 106.87, 90.00
R / Rfree (%) 25.3 / 31.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of C11 Fab, An Adcc Mediating Anti-Hiv-1 Antibody. (pdb code 4fz8). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of C11 Fab, An Adcc Mediating Anti-Hiv-1 Antibody., PDB code: 4fz8:

Zinc binding site 1 out of 1 in 4fz8

Go back to Zinc Binding Sites List in 4fz8
Zinc binding site 1 out of 1 in the Crystal Structure of C11 Fab, An Adcc Mediating Anti-Hiv-1 Antibody.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of C11 Fab, An Adcc Mediating Anti-Hiv-1 Antibody. within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Zn301

b:0.7
occ:1.00
NE2 H:HIS164 1.8 78.1 1.0
ND2 L:ASN137 2.3 79.7 1.0
CD2 H:HIS164 2.3 70.1 1.0
OD1 L:ASN137 2.5 80.7 1.0
OD1 L:ASN138 2.7 94.1 1.0
CG L:ASN137 2.8 75.6 1.0
CE1 H:HIS164 3.0 77.5 1.0
OG1 H:THR183 3.0 75.3 1.0
ND2 L:ASN138 3.4 77.0 1.0
CG L:ASN138 3.4 78.2 1.0
CG H:HIS164 3.6 71.1 1.0
ND1 H:HIS164 3.8 74.8 1.0
O H:GLY162 3.8 69.0 1.0
CB H:THR183 4.2 84.9 1.0
CB L:ASN137 4.3 79.3 1.0
C H:GLY162 4.3 68.9 1.0
CA H:GLY162 4.3 83.4 1.0
OG L:SER174 4.4 60.1 1.0
CG2 H:THR183 4.6 86.1 1.0
CB H:HIS164 4.9 68.2 1.0
CB L:ASN138 4.9 74.0 1.0

Reference:

X.Wu, W.D.Tolbert, M.Pazgier. Crystal Structure of C11 Fab, An Adcc Mediating Anti-Hiv-1 Antibody. To Be Published.
Page generated: Sat Oct 26 23:03:05 2024

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