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Zinc in PDB 4fjp: Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Naproxen at 1.68 A Resolution

Protein crystallography data

The structure of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Naproxen at 1.68 A Resolution, PDB code: 4fjp was solved by P.K.Shukla, L.Gautam, M.Sinha, P.Kaur, S.Sharma, T.P.Singh, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 62.45 / 1.68
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 62.277, 49.945, 65.301, 90.00, 107.00, 90.00
R / Rfree (%) 16.3 / 20.8

Other elements in 4fjp:

The structure of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Naproxen at 1.68 A Resolution also contains other interesting chemical elements:

Iron (Fe) 1 atom

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Naproxen at 1.68 A Resolution (pdb code 4fjp). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Naproxen at 1.68 A Resolution, PDB code: 4fjp:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 4fjp

Go back to Zinc Binding Sites List in 4fjp
Zinc binding site 1 out of 2 in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Naproxen at 1.68 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Naproxen at 1.68 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn707

b:18.4
occ:1.00
OE2 A:GLU659 2.1 21.3 1.0
OE1 A:GLU659 2.2 15.5 1.0
CD A:GLU659 2.5 17.8 1.0
O A:GLY653 3.6 22.0 1.0
CG A:GLU659 4.0 16.4 1.0
O A:ARG654 4.4 17.9 1.0
CA A:PRO655 4.6 15.8 1.0
CB A:GLU659 4.8 16.4 1.0
N A:THR656 4.8 15.2 1.0
C A:GLY653 4.9 21.4 1.0
C A:ARG654 5.0 18.7 1.0

Zinc binding site 2 out of 2 in 4fjp

Go back to Zinc Binding Sites List in 4fjp
Zinc binding site 2 out of 2 in the Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Naproxen at 1.68 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Naproxen at 1.68 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn708

b:20.8
occ:1.00
O A:HOH803 1.9 29.7 1.0
NE2 A:HIS588 2.0 19.4 1.0
CE1 A:HIS588 2.9 14.9 1.0
CD2 A:HIS588 3.1 20.1 1.0
O A:HOH1026 3.8 42.8 1.0
ND1 A:HIS588 4.1 20.4 1.0
CG A:HIS588 4.2 17.0 1.0
CG2 A:VAL591 4.4 20.1 1.0
O A:HOH835 4.7 20.8 1.0

Reference:

P.K.Shukla, L.Gautam, M.Sinha, P.Kaur, S.Sharma, T.P.Singh. Crystal Structure of C-Lobe of Bovine Lactoferrin Complexed with Naproxen at 1.68 A Resolution To Be Published.
Page generated: Wed Dec 16 05:17:45 2020

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