Zinc in PDB 4fe8: Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha)

The structure of Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha), PDB code: 4fe8 was solved by M.Kim, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.00 / 3.00
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	155.052, 177.278, 78.868, 90.00, 109.03, 90.00
R / Rfree (%)	22.7 / 27.5

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 31;

Binding sites:

The binding sites of Zinc atom in the Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha) (pdb code 4fe8). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 31 binding sites of Zinc where determined in the Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha), PDB code: 4fe8:
Jump to Zinc binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Zinc binding site 1 out of 31 in the Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn501 b:60.0 occ:0.50 NZ A:LYS313 4.0 0.5 1.0 CD A:GLU310 4.4 0.6 1.0 OE2 A:GLU310 4.4 0.7 1.0 CG A:GLU310 4.5 0.1 1.0 CE A:LYS313 4.7 0.5 1.0 OE1 A:GLU310 4.7 0.5 1.0

Zinc binding site 2 out of 31 in the Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn502 b:60.0 occ:0.50 OE1 A:GLU44 3.5 99.3 1.0 OD1 A:ASN12 3.8 90.7 1.0 OE2 A:GLU44 3.8 1.0 1.0 N A:LYS42 4.0 0.7 1.0 CD A:GLU44 4.1 99.9 1.0 CA A:LYS42 4.1 0.0 1.0 CH2 A:TRP62 4.3 94.7 1.0 ND2 A:ASN12 4.4 91.6 1.0 CG A:ASN12 4.4 89.2 1.0 CG A:LYS42 5.0 0.5 1.0

Zinc binding site 3 out of 31 in the Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn503 b:60.0 occ:0.50 O A:HIS39 2.5 0.8 1.0 ND1 A:HIS39 2.6 0.4 1.0 CE1 A:HIS39 3.1 0.7 1.0 C A:HIS39 3.7 96.7 1.0 CG A:HIS39 3.7 0.8 1.0 OD1 A:ASP41 3.9 0.6 1.0 NE2 A:HIS39 4.2 0.1 1.0 CB A:HIS39 4.3 94.6 1.0 CA A:PRO40 4.5 0.8 1.0 N A:PRO40 4.5 96.6 1.0 C A:PRO40 4.5 0.7 1.0 CD2 A:HIS39 4.6 0.5 1.0 CA A:HIS39 4.6 92.9 1.0 N A:ASP41 4.6 0.6 1.0 CG A:ASP41 4.9 0.1 1.0

Zinc binding site 4 out of 31 in the Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 4 of Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn504 b:60.0 occ:0.50 CE1 A:HIS203 2.5 0.9 1.0 O A:HOH624 2.9 14.4 1.0 O A:HOH625 3.0 29.9 1.0 NE2 A:HIS203 3.2 0.3 1.0 NZ A:LYS137 3.4 0.3 1.0 ND1 A:HIS203 3.7 0.7 1.0 CB A:ASN201 4.2 0.9 1.0 OD1 A:ASN201 4.3 0.5 1.0 CB A:PRO133 4.4 90.6 1.0 CG A:ASN201 4.5 0.7 1.0 CD2 A:HIS203 4.5 1.0 1.0 CE A:LYS137 4.7 0.6 1.0 CG A:HIS203 4.8 0.1 1.0 O A:PRO133 4.8 98.5 1.0

Zinc binding site 5 out of 31 in the Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 5 of Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha) within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn505 b:60.0 occ:0.30 OH A:TYR17 3.0 0.9 1.0 O A:HOH632 3.3 27.9 1.0 CZ A:TYR17 4.1 0.0 1.0 CE2 A:TYR17 4.4 0.1 1.0 CE1 A:HIS39 4.5 0.7 1.0 O A:GLY13 4.9 0.1 1.0 ND1 A:HIS39 5.0 0.4 1.0

Zinc binding site 6 out of 31 in the Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 6 of Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha) within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn501 b:60.0 occ:0.50 CE1 B:HIS203 2.8 0.2 1.0 O B:HOH658 3.1 10.3 1.0 NE2 B:HIS203 3.2 0.4 1.0 OD1 B:ASN201 3.9 0.6 1.0 ND1 B:HIS203 4.0 0.1 1.0 CB B:ASN201 4.2 1.0 1.0 CG B:ASN201 4.3 0.1 1.0 CB B:PRO133 4.3 0.3 1.0 CD2 B:HIS203 4.5 0.8 1.0 O B:PRO133 4.7 0.5 1.0 CG B:HIS203 5.0 0.8 1.0 O B:ASN201 5.0 0.1 1.0 CD B:LYS137 5.0 0.9 1.0 C B:PRO133 5.0 0.2 1.0

Zinc binding site 7 out of 31 in the Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 7 of Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha) within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn502 b:60.0 occ:0.50 OE1 B:GLU38 3.6 0.4 1.0 O B:HOH627 3.6 8.9 1.0 O B:HOH628 4.3 30.2 1.0 CD B:GLU38 4.5 0.2 1.0 OE2 B:GLU38 4.8 0.6 1.0 CG2 B:VAL8 4.8 94.1 1.0 NZ B:LYS6 4.9 1.0 1.0

Zinc binding site 8 out of 31 in the Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 8 of Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha) within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn503 b:60.0 occ:0.40 O B:HOH633 2.9 24.1 1.0 OD1 B:ASP65 2.9 85.5 1.0 CG B:ASP65 2.9 85.3 1.0 OD2 B:ASP65 3.0 87.0 1.0 CB B:ASP65 3.8 84.5 1.0 CG B:MET330 3.9 77.9 1.0 SD B:MET330 4.0 80.7 1.0 O B:HOH634 4.9 42.6 1.0 CB B:MET330 4.9 77.0 1.0

Zinc binding site 9 out of 31 in the Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 9 of Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha) within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn504 b:60.0 occ:0.60 OE1 B:GLU288 2.7 0.8 1.0 OE2 B:GLU288 2.9 0.5 1.0 CD B:GLU288 3.0 0.4 1.0 NZ B:LYS26 3.7 0.8 1.0 CE B:LYS26 4.0 0.2 1.0 CG B:GLU288 4.4 0.8 1.0 CB B:GLU288 4.7 0.9 1.0

Zinc binding site 10 out of 31 in the Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 10 of Crystal Structure of HTT36Q3H-EX1-X1-C1(Alpha) within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn505 b:60.0 occ:0.60 ZN B:ZN510 2.9 55.5 0.5 OE2 B:GLU172 3.5 0.5 1.0 N B:ASN173 4.1 0.4 1.0 CD B:GLU172 4.6 97.5 1.0 OD1 B:ASN173 4.7 0.6 1.0 CA B:GLU172 4.8 95.0 1.0 CA B:ASN173 4.9 0.9 1.0 C B:GLU172 5.0 98.3 1.0

M.Kim, M.Kim. N/A N/A.
ISSN: ISSN 1933-690X
PubMed: 23370273
DOI: 10.4161/PRI.23807