Atomistry » Zinc » PDB 4ci2-4csa » 4cos
Atomistry »
  Zinc »
    PDB 4ci2-4csa »
      4cos »

Zinc in PDB 4cos: Crystal Structure of the Phd-Bromo-Pwwp Cassette of Human PRKCBP1

Protein crystallography data

The structure of Crystal Structure of the Phd-Bromo-Pwwp Cassette of Human PRKCBP1, PDB code: 4cos was solved by T.Krojer, P.Savitsky, J.A.Newman, C.D.O.Cooper, F.Von Delft, C.H.Arrowsmith, C.Bountra, A.Edwards, P.Filippakopoulos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.20 / 1.67
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 66.955, 68.835, 70.350, 90.00, 90.00, 90.00
R / Rfree (%) 17.589 / 21.039

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of the Phd-Bromo-Pwwp Cassette of Human PRKCBP1 (pdb code 4cos). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Crystal Structure of the Phd-Bromo-Pwwp Cassette of Human PRKCBP1, PDB code: 4cos:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in 4cos

Go back to Zinc Binding Sites List in 4cos
Zinc binding site 1 out of 3 in the Crystal Structure of the Phd-Bromo-Pwwp Cassette of Human PRKCBP1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Phd-Bromo-Pwwp Cassette of Human PRKCBP1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1400

b:22.4
occ:1.00
NE2 A:HIS278 2.1 21.9 1.0
SG A:CYS258 2.3 28.2 1.0
SG A:CYS255 2.3 22.6 1.0
SG A:CYS274 2.3 25.8 1.0
CD2 A:HIS278 2.9 21.2 1.0
CE1 A:HIS278 3.2 23.1 1.0
CB A:CYS255 3.3 23.2 1.0
CB A:CYS274 3.3 26.1 1.0
CB A:CYS258 3.4 24.5 1.0
N A:CYS258 3.6 22.2 1.0
CA A:CYS258 3.9 23.3 1.0
CG A:HIS278 4.1 21.0 1.0
ND1 A:HIS278 4.2 22.3 1.0
O A:HOH2215 4.2 46.9 1.0
O A:HOH2224 4.3 23.4 1.0
CB A:GLU257 4.5 27.1 1.0
C A:GLU257 4.5 21.8 1.0
CA A:CYS255 4.7 22.9 1.0
CA A:CYS274 4.8 26.7 1.0
O A:HOH2223 4.8 41.4 1.0
CA A:GLU257 4.9 23.7 1.0
O A:CYS255 5.0 22.7 1.0
C A:CYS255 5.0 23.1 1.0

Zinc binding site 2 out of 3 in 4cos

Go back to Zinc Binding Sites List in 4cos
Zinc binding site 2 out of 3 in the Crystal Structure of the Phd-Bromo-Pwwp Cassette of Human PRKCBP1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of the Phd-Bromo-Pwwp Cassette of Human PRKCBP1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1401

b:23.8
occ:1.00
ND1 A:HIS111 2.1 24.2 1.0
SG A:CYS94 2.3 25.9 1.0
SG A:CYS114 2.3 27.5 1.0
SG A:CYS91 2.3 24.0 1.0
CE1 A:HIS111 3.0 25.4 1.0
CB A:CYS91 3.1 21.8 1.0
CG A:HIS111 3.1 23.6 1.0
CB A:CYS94 3.3 25.3 1.0
CB A:CYS114 3.4 26.5 1.0
CB A:HIS111 3.5 23.7 1.0
N A:CYS94 3.8 22.3 1.0
O A:HOH2035 4.1 44.3 1.0
CA A:CYS94 4.1 24.4 1.0
N A:HIS111 4.2 22.6 1.0
NE2 A:HIS111 4.2 24.1 1.0
CD2 A:HIS111 4.2 24.8 1.0
CA A:HIS111 4.4 22.9 1.0
CA A:CYS91 4.5 22.4 1.0
CB A:VAL93 4.6 24.4 1.0
CA A:CYS114 4.7 27.4 1.0
O A:HOH2036 4.7 30.7 1.0
C A:VAL93 4.8 24.7 1.0
C A:CYS94 4.9 23.0 1.0
C A:CYS91 5.0 22.7 1.0

Zinc binding site 3 out of 3 in 4cos

Go back to Zinc Binding Sites List in 4cos
Zinc binding site 3 out of 3 in the Crystal Structure of the Phd-Bromo-Pwwp Cassette of Human PRKCBP1


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Crystal Structure of the Phd-Bromo-Pwwp Cassette of Human PRKCBP1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1402

b:28.5
occ:1.00
SG A:CYS106 2.3 29.9 1.0
SG A:CYS127 2.3 29.4 1.0
SG A:CYS103 2.3 31.6 1.0
SG A:CYS130 2.3 33.0 1.0
CB A:CYS103 3.3 33.0 1.0
CB A:CYS130 3.3 32.8 1.0
CB A:CYS106 3.4 32.8 1.0
CB A:CYS127 3.4 30.9 1.0
N A:CYS127 3.8 36.0 1.0
N A:CYS106 3.8 34.8 1.0
N A:CYS130 4.1 30.1 1.0
CA A:CYS106 4.2 33.4 1.0
CA A:CYS127 4.2 32.5 1.0
CA A:CYS130 4.3 33.0 1.0
NH1 A:ARG108 4.6 23.5 1.0
CB A:LEU105 4.6 44.5 1.0
C A:CYS106 4.7 30.5 1.0
C A:LEU105 4.7 41.8 1.0
O A:CYS127 4.7 32.8 1.0
CA A:CYS103 4.7 32.5 1.0
O A:CYS106 4.7 32.4 1.0
C A:CYS127 4.7 32.6 1.0
CB A:ARG108 4.8 24.2 1.0
CD A:ARG108 4.9 22.4 1.0
C A:PHE126 4.9 37.8 1.0
N A:LEU105 5.0 45.5 1.0
CA A:LEU105 5.0 42.0 1.0

Reference:

P.Filippakopoulos, T.Krojer, P.Savitsky, J.A.Newman, C.D.O.Cooper, F.Von Delft, C.H.Arrowsmith, C.Bountra, A.Edwards, P.Filippakopoulos. N/A N/A.
Page generated: Wed Dec 16 05:09:02 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy