Zinc in PDB 4brb: Crystal Structure of the Integral Membrane Enzyme Dgka-Ref, Delta 7

All present enzymatic activity of Crystal Structure of the Integral Membrane Enzyme Dgka-Ref, Delta 7:
2.7.1.107;

The structure of Crystal Structure of the Integral Membrane Enzyme Dgka-Ref, Delta 7, PDB code: 4brb was solved by D.Li, M.Caffrey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.233 / 2.55
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	75.500, 91.570, 143.570, 90.00, 90.00, 90.00
R / Rfree (%)	21.73 / 26.14

The binding sites of Zinc atom in the Crystal Structure of the Integral Membrane Enzyme Dgka-Ref, Delta 7 (pdb code 4brb). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Integral Membrane Enzyme Dgka-Ref, Delta 7, PDB code: 4brb:

Zinc binding site 1 out of 1 in the Crystal Structure of the Integral Membrane Enzyme Dgka-Ref, Delta 7


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Integral Membrane Enzyme Dgka-Ref, Delta 7 within 5.0Å range: probe atom residue distance (Å) B Occ D:Zn1122 b:40.5 occ:0.54 OE2 D:GLU28 2.0 87.3 1.0 OE1 D:GLU28 2.1 80.5 1.0 OE1 D:GLU76 2.1 87.2 1.0 OXT D:ACT1124 2.2 56.6 1.0 OE2 D:GLU76 2.2 85.6 1.0 OA2 D:FLC1123 2.2 71.3 1.0 CD D:GLU28 2.3 75.9 1.0 CD D:GLU76 2.4 81.4 1.0 CAC D:FLC1123 3.3 76.6 1.0 C D:ACT1124 3.3 62.2 1.0 OA1 D:FLC1123 3.6 78.4 1.0 CG D:GLU28 3.7 62.0 1.0 O D:ACT1124 3.8 65.7 1.0 CG D:GLU76 3.9 61.8 1.0 CH3 D:ACT1124 4.6 60.0 1.0 CA D:FLC1123 4.6 82.3 1.0 CB D:GLU28 4.6 52.8 1.0 CB D:GLU76 4.7 43.9 1.0 OG D:SER73 4.8 44.5 1.0

D.Li, M.Caffrey. Renaturing Membrane Proteins in the Lipid Cubic Phase, A Nanoporous Membrane Mimetic. Sci.Rep. V. 4 5806 2014.
ISSN: ISSN 2045-2322
PubMed: 25055873
DOI: 10.1038/SREP05806