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Zinc in PDB 4adn: Fusidic Acid Resistance Protein Fusb

Protein crystallography data

The structure of Fusidic Acid Resistance Protein Fusb, PDB code: 4adn was solved by X.Guo, K.Peisker, K.Backbro, Y.Chen, R.K.Kiran, S.Sanyal, M.Selmer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.774 / 1.65
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 75.020, 122.410, 52.920, 90.00, 90.00, 90.00
R / Rfree (%) 16.31 / 20.21

Other elements in 4adn:

The structure of Fusidic Acid Resistance Protein Fusb also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Sodium (Na) 8 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Fusidic Acid Resistance Protein Fusb (pdb code 4adn). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Fusidic Acid Resistance Protein Fusb, PDB code: 4adn:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 4adn

Go back to Zinc Binding Sites List in 4adn
Zinc binding site 1 out of 2 in the Fusidic Acid Resistance Protein Fusb


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Fusidic Acid Resistance Protein Fusb within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1223

b:15.4
occ:1.00
SG A:CYS204 2.3 14.8 1.0
SG A:CYS198 2.3 16.5 1.0
SG A:CYS169 2.3 16.5 1.0
SG A:CYS166 2.4 13.8 1.0
CB A:CYS166 3.1 14.8 1.0
CB A:CYS204 3.2 14.6 1.0
CB A:CYS169 3.3 19.5 1.0
CB A:CYS198 3.3 16.3 1.0
CA A:CYS204 3.6 14.4 1.0
N A:CYS169 3.7 16.7 1.0
N A:CYS198 3.9 14.2 1.0
CA A:CYS169 4.1 18.1 1.0
CA A:CYS198 4.2 13.8 1.0
OE1 A:GLN207 4.2 25.3 1.0
O A:CYS204 4.4 17.1 1.0
C A:CYS204 4.4 15.9 1.0
CB A:ILE168 4.5 13.4 1.0
CA A:CYS166 4.5 14.1 1.0
N A:CYS204 4.7 16.6 1.0
O A:HOH2179 4.8 17.4 1.0
C A:ILE168 4.8 15.3 1.0
OG A:SER173 4.9 22.0 1.0
C A:CYS169 5.0 17.1 1.0

Zinc binding site 2 out of 2 in 4adn

Go back to Zinc Binding Sites List in 4adn
Zinc binding site 2 out of 2 in the Fusidic Acid Resistance Protein Fusb


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Fusidic Acid Resistance Protein Fusb within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn1223

b:14.4
occ:1.00
SG B:CYS198 2.3 14.5 1.0
SG B:CYS204 2.3 14.2 1.0
SG B:CYS169 2.4 13.8 1.0
SG B:CYS166 2.4 13.8 1.0
CB B:CYS166 3.1 13.3 1.0
CB B:CYS204 3.2 13.5 1.0
CB B:CYS198 3.2 13.7 1.0
CB B:CYS169 3.3 14.8 1.0
CA B:CYS204 3.6 12.1 1.0
N B:CYS169 3.7 16.0 1.0
N B:CYS198 3.9 13.9 1.0
CA B:CYS169 4.1 14.3 1.0
CA B:CYS198 4.2 13.1 1.0
OE1 B:GLN207 4.3 20.6 1.0
O B:CYS204 4.4 13.1 1.0
C B:CYS204 4.4 11.8 1.0
CB B:ILE168 4.5 15.6 1.0
CA B:CYS166 4.6 12.6 1.0
N B:CYS204 4.7 14.1 1.0
C B:ILE168 4.8 16.4 1.0
O B:HOH2145 4.8 17.9 1.0
OG B:SER173 4.9 20.2 1.0
CA B:ILE168 5.0 14.7 1.0
C B:CYS169 5.0 14.9 1.0
CG2 B:ILE168 5.0 19.2 1.0
N B:ILE168 5.0 15.2 1.0

Reference:

X.Guo, K.Peisker, K.Backbro, Y.Chen, R.K.Kiran, C.S.Mandava, S.Sanyal, M.Selmer. Structure and Function of Fusb: An Elongation Factor G-Binding Fusidic Acid Resistance Protein Active in Ribosomal Translocation and Recycling Open Biol. V. 2 20016 2012.
ISSN: ISSN 2046-2441
PubMed: 22645663
DOI: 10.1098/RSOB.120016
Page generated: Wed Dec 16 05:03:03 2020

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