Zinc in PDB 3wwl: Crystal Structure of Lysine Biosynthetic Amino Acid Carrier Protein Lysw From Thermus Thermophilus Conjugated with Alpha-Aminoadipate

The structure of Crystal Structure of Lysine Biosynthetic Amino Acid Carrier Protein Lysw From Thermus Thermophilus Conjugated with Alpha-Aminoadipate, PDB code: 3wwl was solved by A.Yoshida, T.Tomita, T.Kuzuyama, M.Nishiyama, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	21.19 / 1.20
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	48.932, 48.932, 38.654, 90.00, 90.00, 120.00
R / Rfree (%)	14.5 / 15.5

The binding sites of Zinc atom in the Crystal Structure of Lysine Biosynthetic Amino Acid Carrier Protein Lysw From Thermus Thermophilus Conjugated with Alpha-Aminoadipate (pdb code 3wwl). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Lysine Biosynthetic Amino Acid Carrier Protein Lysw From Thermus Thermophilus Conjugated with Alpha-Aminoadipate, PDB code: 3wwl:

Zinc binding site 1 out of 1 in the Crystal Structure of Lysine Biosynthetic Amino Acid Carrier Protein Lysw From Thermus Thermophilus Conjugated with Alpha-Aminoadipate


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Lysine Biosynthetic Amino Acid Carrier Protein Lysw From Thermus Thermophilus Conjugated with Alpha-Aminoadipate within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn102 b:11.4 occ:1.00 SG A:CYS28 2.3 11.6 1.0 SG A:CYS8 2.3 12.3 1.0 SG A:CYS25 2.3 10.4 1.0 SG A:CYS5 2.3 10.6 1.0 CB A:CYS25 3.1 9.6 1.0 CB A:CYS5 3.1 10.9 1.0 CB A:CYS28 3.2 11.6 1.0 CB A:CYS8 3.3 12.8 1.0 N A:CYS8 3.8 12.8 1.0 N A:CYS28 3.8 11.7 1.0 CA A:CYS28 4.1 11.7 1.0 CA A:CYS8 4.1 12.9 1.0 CB A:ALA30 4.5 11.4 1.0 CA A:CYS25 4.6 9.7 1.0 CA A:CYS5 4.6 10.9 1.0 CB A:ALA10 4.7 14.0 1.0 C A:CYS28 4.8 11.3 1.0 C A:CYS8 4.8 13.1 1.0 C A:GLU7 4.8 13.3 1.0 O A:HOH202 4.8 26.3 1.0 CB A:GLU7 4.8 12.3 1.0 C A:ASP27 4.9 11.9 1.0 N A:GLY9 4.9 13.1 1.0 N A:GLY29 4.9 11.3 1.0 N A:ALA30 4.9 10.9 1.0 N A:ALA10 5.0 13.2 1.0 O A:HOH220 5.0 22.3 1.0 CB A:ASP27 5.0 12.4 1.0

A.Yoshida, T.Tomita, T.Fujimura, C.Nishiyama, T.Kuzuyama, M.Nishiyama. Structural Insight Into Amino Group-Carrier Protein-Mediated Lysine Biosynthesis: Crystal Structure of the Lysz-Lysw Complex From Thermus Thermophilus J.Biol.Chem. 2014.
ISSN: ESSN 1083-351X
DOI: 10.1074/JBC.M114.595983