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Zinc in PDB 3wg7: A 1.9 Angstrom Radiation Damage Free X-Ray Structure of Large (420KDA) Protein By Femtosecond Crystallography
Enzymatic activity of A 1.9 Angstrom Radiation Damage Free X-Ray Structure of Large (420KDA) Protein By Femtosecond Crystallography
All present enzymatic activity of A 1.9 Angstrom Radiation Damage Free X-Ray Structure of Large (420KDA) Protein By Femtosecond Crystallography:
1.9.3.1;
1.9.3.1;
Protein crystallography data
The structure of A 1.9 Angstrom Radiation Damage Free X-Ray Structure of Large (420KDA) Protein By Femtosecond Crystallography, PDB code: 3wg7
was solved by
K.Hirata,
K.Shinzawa-Itoh,
N.Yano,
S.Takemura,
K.Kato,
M.Hatanaka,
K.Muramoto,
T.Kawahara,
T.Tsukihara,
E.Yamashita,
K.Tono,
G.Ueno,
T.Hikima,
H.Murakami,
Y.Inubushi,
M.Yabashi,
T.Ishikawa,
M.Yamamoto,
T.Ogura,
H.Sugimoto,
J.R.Shen,
S.Yoshikawa,
H.Ago,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 40.00 / 1.90 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 182.600, 204.510, 178.290, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 19.5 / 23 |
Other elements in 3wg7:
The structure of A 1.9 Angstrom Radiation Damage Free X-Ray Structure of Large (420KDA) Protein By Femtosecond Crystallography also contains other interesting chemical elements:
| Magnesium | (Mg) | 2 atoms |
| Iron | (Fe) | 4 atoms |
| Copper | (Cu) | 6 atoms |
| Sodium | (Na) | 4 atoms |
Zinc Binding Sites:
The binding sites of Zinc atom in the A 1.9 Angstrom Radiation Damage Free X-Ray Structure of Large (420KDA) Protein By Femtosecond Crystallography
(pdb code 3wg7). This binding sites where shown within
5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the A 1.9 Angstrom Radiation Damage Free X-Ray Structure of Large (420KDA) Protein By Femtosecond Crystallography, PDB code: 3wg7:
Jump to Zinc binding site number: 1; 2;
In total 2 binding sites of Zinc where determined in the A 1.9 Angstrom Radiation Damage Free X-Ray Structure of Large (420KDA) Protein By Femtosecond Crystallography, PDB code: 3wg7:
Jump to Zinc binding site number: 1; 2;
Zinc binding site 1 out of 2 in 3wg7
Go back to
Zinc Binding Sites List in 3wg7
Zinc binding site 1 out
of 2 in the A 1.9 Angstrom Radiation Damage Free X-Ray Structure of Large (420KDA) Protein By Femtosecond Crystallography
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 1 of A 1.9 Angstrom Radiation Damage Free X-Ray Structure of Large (420KDA) Protein By Femtosecond Crystallography within 5.0Å range:
|
Zinc binding site 2 out of 2 in 3wg7
Go back to
Zinc Binding Sites List in 3wg7
Zinc binding site 2 out
of 2 in the A 1.9 Angstrom Radiation Damage Free X-Ray Structure of Large (420KDA) Protein By Femtosecond Crystallography
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Zinc with other atoms in the Zn binding
site number 2 of A 1.9 Angstrom Radiation Damage Free X-Ray Structure of Large (420KDA) Protein By Femtosecond Crystallography within 5.0Å range:
|
Reference:
K.Hirata,
K.Shinzawa-Itoh,
N.Yano,
S.Takemura,
K.Kato,
M.Hatanaka,
K.Muramoto,
T.Kawahara,
T.Tsukihara,
E.Yamashita,
K.Tono,
G.Ueno,
T.Hikima,
H.Murakami,
Y.Inubushi,
M.Yabashi,
T.Ishikawa,
M.Yamamoto,
T.Ogura,
H.Sugimoto,
J.R.Shen,
S.Yoshikawa,
H.Ago.
Determination of Damage-Free Crystal Structure of An X-Ray-Sensitive Protein Using An Xfel. Nat.Methods 2014.
ISSN: ESSN 1548-7105
PubMed: 24813624
DOI: 10.1038/NMETH.2962
Page generated: Sat Oct 26 18:04:53 2024
ISSN: ESSN 1548-7105
PubMed: 24813624
DOI: 10.1038/NMETH.2962
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