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Zinc in PDB 3v2j: Effect of Sucrose and Glycerol As Cryoprotectans, on the Inhibition of Human Carbonic Anhydrase II

Enzymatic activity of Effect of Sucrose and Glycerol As Cryoprotectans, on the Inhibition of Human Carbonic Anhydrase II

All present enzymatic activity of Effect of Sucrose and Glycerol As Cryoprotectans, on the Inhibition of Human Carbonic Anhydrase II:
4.2.1.1;

Protein crystallography data

The structure of Effect of Sucrose and Glycerol As Cryoprotectans, on the Inhibition of Human Carbonic Anhydrase II, PDB code: 3v2j was solved by M.Aggarwal, A.Mckenna, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.03 / 1.70
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.811, 41.704, 72.929, 90.00, 104.49, 90.00
R / Rfree (%) 14 / 16.7

Zinc Binding Sites:

The binding sites of Zinc atom in the Effect of Sucrose and Glycerol As Cryoprotectans, on the Inhibition of Human Carbonic Anhydrase II (pdb code 3v2j). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Effect of Sucrose and Glycerol As Cryoprotectans, on the Inhibition of Human Carbonic Anhydrase II, PDB code: 3v2j:

Zinc binding site 1 out of 1 in 3v2j

Go back to Zinc Binding Sites List in 3v2j
Zinc binding site 1 out of 1 in the Effect of Sucrose and Glycerol As Cryoprotectans, on the Inhibition of Human Carbonic Anhydrase II


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Effect of Sucrose and Glycerol As Cryoprotectans, on the Inhibition of Human Carbonic Anhydrase II within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn301

b:9.2
occ:1.00
 NE2 A:HIS94 2.0 7.2 1.0
NE2 A:HIS96 2.0 7.3 1.0
ND1 A:HIS119 2.1 7.0 1.0
N1 A:AZM302 2.1 10.0 1.0
CE1 A:HIS119 2.9 7.8 1.0
CD2 A:HIS94 3.0 8.4 1.0
CD2 A:HIS96 3.0 6.0 1.0
CE1 A:HIS94 3.0 11.6 1.0
S1 A:AZM302 3.0 10.2 1.0
CE1 A:HIS96 3.0 9.5 1.0
HE1 A:HIS119 3.1 9.3 1.0
HD2 A:HIS94 3.1 10.0 1.0
CG A:HIS119 3.1 6.5 1.0
O2 A:AZM302 3.1 10.3 1.0
HD2 A:HIS96 3.2 7.2 1.0
HB2 A:HIS119 3.2 6.8 1.0
HE1 A:HIS94 3.2 13.9 1.0
HE1 A:HIS96 3.3 11.4 1.0
CB A:HIS119 3.6 5.7 1.0
HG1 A:THR199 3.7 11.0 1.0
HB3 A:HIS119 3.7 6.8 1.0
OG1 A:THR199 4.0 9.2 1.0
OE1 A:GLU106 4.0 10.0 1.0
NE2 A:HIS119 4.1 7.7 1.0
ND1 A:HIS94 4.1 9.3 1.0
CG A:HIS94 4.1 7.3 1.0
ND1 A:HIS96 4.2 9.1 1.0
O1 A:AZM302 4.2 11.6 1.0
CG A:HIS96 4.2 7.7 1.0
C1 A:AZM302 4.2 15.2 1.0
HH2 A:TRP209 4.2 12.7 1.0
CD2 A:HIS119 4.2 8.3 1.0
HE2 A:HIS119 4.8 9.3 1.0
N3 A:AZM302 4.9 15.9 1.0
HD1 A:HIS94 4.9 11.2 1.0
CD A:GLU106 4.9 9.9 1.0
HD1 A:HIS96 4.9 10.9 1.0
HG11 A:VAL143 5.0 10.9 1.0

Reference:

M.Aggarwal, A.Mckenna. Effect of Sucrose and Glycerol As Cryoprotectans, on the Inhibition of Human Carbonic Anhydrase II To Be Published.
Page generated: Sat Oct 26 17:33:45 2024

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