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Zinc in PDB 3tqo: Structure of the Cysteinyl-Trna Synthetase (Cyss) From Coxiella Burnetii.

Enzymatic activity of Structure of the Cysteinyl-Trna Synthetase (Cyss) From Coxiella Burnetii.

All present enzymatic activity of Structure of the Cysteinyl-Trna Synthetase (Cyss) From Coxiella Burnetii.:
6.1.1.16;

Protein crystallography data

The structure of Structure of the Cysteinyl-Trna Synthetase (Cyss) From Coxiella Burnetii., PDB code: 3tqo was solved by M.Rudolph, J.Cheung, M.C.Franklin, M.Cassidy, E.Gary, F.Burshteyn, J.Love, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.23 / 2.30
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 97.632, 97.632, 108.138, 90.00, 90.00, 90.00
R / Rfree (%) 20.8 / 26

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of the Cysteinyl-Trna Synthetase (Cyss) From Coxiella Burnetii. (pdb code 3tqo). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of the Cysteinyl-Trna Synthetase (Cyss) From Coxiella Burnetii., PDB code: 3tqo:

Zinc binding site 1 out of 1 in 3tqo

Go back to Zinc Binding Sites List in 3tqo
Zinc binding site 1 out of 1 in the Structure of the Cysteinyl-Trna Synthetase (Cyss) From Coxiella Burnetii.


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of the Cysteinyl-Trna Synthetase (Cyss) From Coxiella Burnetii. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn461

b:25.6
occ:1.00
NE2 A:HIS235 2.2 21.5 1.0
SG A:CYS29 2.4 17.9 1.0
SG A:CYS210 2.4 22.5 1.0
O A:HOH580 2.4 4.8 1.0
CD2 A:HIS235 3.1 25.0 1.0
CB A:CYS29 3.2 14.3 1.0
CE1 A:HIS235 3.3 23.6 1.0
CB A:CYS210 3.4 21.7 1.0
OE2 A:GLU239 3.5 21.4 1.0
CA A:CYS29 4.1 17.4 1.0
NE1 A:TRP206 4.2 24.6 1.0
CG A:HIS235 4.3 25.9 1.0
ND1 A:HIS235 4.3 25.7 1.0
OD1 A:ASN67 4.4 23.4 1.0
CD A:GLU239 4.5 26.1 1.0
CE2 A:TRP206 4.6 26.7 1.0
CZ2 A:TRP206 4.7 23.9 1.0
CE2 A:TYR27 4.8 26.4 1.0
ND2 A:ASN67 4.8 21.3 1.0
O A:HOH478 4.8 23.2 1.0
OH A:TYR27 4.8 27.1 1.0
CE1 A:HIS236 4.8 17.5 1.0
CA A:CYS210 4.9 20.5 1.0
CG A:ASN67 5.0 24.8 1.0

Reference:

M.C.Franklin, J.Cheung, M.J.Rudolph, F.Burshteyn, M.Cassidy, E.Gary, B.Hillerich, Z.K.Yao, P.R.Carlier, M.Totrov, J.D.Love. Structural Genomics For Drug Design Against the Pathogen Coxiella Burnetii. Proteins V. 83 2124 2015.
ISSN: ISSN 0887-3585
PubMed: 26033498
DOI: 10.1002/PROT.24841
Page generated: Sat Oct 26 16:41:02 2024

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