Atomistry » Zinc » PDB 3sjc-3sub » 3sjc
Atomistry »
  Zinc »
    PDB 3sjc-3sub »
      3sjc »

Zinc in PDB 3sjc: Crystal Structure of S.Cerevisiae GET3 in the Semi-Open State in Complex with GET1 Cytosolic Domain

Protein crystallography data

The structure of Crystal Structure of S.Cerevisiae GET3 in the Semi-Open State in Complex with GET1 Cytosolic Domain, PDB code: 3sjc was solved by S.Reitz, K.Wild, I.Sinning, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.44 / 3.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 65.071, 112.243, 135.978, 90.00, 103.82, 90.00
R / Rfree (%) 20.9 / 25.9

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of S.Cerevisiae GET3 in the Semi-Open State in Complex with GET1 Cytosolic Domain (pdb code 3sjc). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of S.Cerevisiae GET3 in the Semi-Open State in Complex with GET1 Cytosolic Domain, PDB code: 3sjc:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 3sjc

Go back to Zinc Binding Sites List in 3sjc
Zinc binding site 1 out of 2 in the Crystal Structure of S.Cerevisiae GET3 in the Semi-Open State in Complex with GET1 Cytosolic Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of S.Cerevisiae GET3 in the Semi-Open State in Complex with GET1 Cytosolic Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn363

b:0.2
occ:1.00
SG B:CYS288 2.3 0.7 1.0
SG A:CYS285 2.5 0.5 1.0
SG B:CYS285 2.6 0.0 1.0
SG A:CYS288 2.6 0.9 1.0
CB B:CYS288 3.6 0.5 1.0
N B:CYS288 3.9 0.9 1.0
CB A:CYS288 4.0 94.0 1.0
CA B:CYS288 4.2 90.0 1.0
N A:CYS288 4.2 76.0 1.0
CB B:CYS285 4.2 0.7 1.0
CB A:CYS285 4.2 0.4 1.0
CA A:CYS288 4.5 87.3 1.0
CB A:ARG287 4.6 67.9 1.0
CG A:ARG287 4.6 68.8 1.0
N A:CYS285 4.6 0.9 1.0
C B:ARG287 4.6 0.5 1.0
CB B:ARG287 4.7 0.5 1.0
C A:ARG287 4.9 77.5 1.0
CA A:CYS285 4.9 0.3 1.0
N B:ARG287 4.9 0.2 1.0

Zinc binding site 2 out of 2 in 3sjc

Go back to Zinc Binding Sites List in 3sjc
Zinc binding site 2 out of 2 in the Crystal Structure of S.Cerevisiae GET3 in the Semi-Open State in Complex with GET1 Cytosolic Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of S.Cerevisiae GET3 in the Semi-Open State in Complex with GET1 Cytosolic Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Zn363

b:0.2
occ:1.00
SG E:CYS285 2.5 0.1 1.0
SG F:CYS288 2.5 0.1 1.0
SG E:CYS288 2.5 0.1 1.0
SG F:CYS285 3.0 0.4 1.0
N E:CYS288 3.6 0.1 1.0
CB E:CYS288 3.7 0.3 1.0
CB F:CYS288 4.0 0.6 1.0
CA E:CYS288 4.0 0.6 1.0
CB E:CYS285 4.1 0.7 1.0
CB E:ARG287 4.2 0.5 1.0
C E:ARG287 4.2 0.7 1.0
N F:CYS288 4.3 0.5 1.0
CB F:CYS285 4.5 0.3 1.0
N E:ARG287 4.5 0.9 1.0
CA E:ARG287 4.5 0.7 1.0
CA F:CYS288 4.6 0.3 1.0

Reference:

S.Stefer, S.Reitz, F.Wang, K.Wild, Y.Y.Pang, D.Schwarz, J.Bomke, C.Hein, F.Lohr, F.Bernhard, V.Denic, V.Dotsch, I.Sinning. Structural Basis For Tail-Anchored Membrane Protein Biogenesis By the GET3-Receptor Complex. Science V. 333 758 2011.
ISSN: ISSN 0036-8075
PubMed: 21719644
DOI: 10.1126/SCIENCE.1207125
Page generated: Sat Oct 26 15:51:42 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy