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Zinc in PDB 3sbj: Mutm Slanted Complex 7

Protein crystallography data

The structure of Mutm Slanted Complex 7, PDB code: 3sbj was solved by R.J.Sung, M.Zhang, G.L.Verdine, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.69 / 2.10
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 45.188, 93.541, 104.650, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 23.6

Zinc Binding Sites:

The binding sites of Zinc atom in the Mutm Slanted Complex 7 (pdb code 3sbj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Mutm Slanted Complex 7, PDB code: 3sbj:

Zinc binding site 1 out of 1 in 3sbj

Go back to Zinc Binding Sites List in 3sbj
Zinc binding site 1 out of 1 in the Mutm Slanted Complex 7


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Mutm Slanted Complex 7 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn300

b:26.3
occ:1.00
SG A:CYS272 2.3 26.4 1.0
SG A:CYS269 2.4 26.8 1.0
SG A:CYS249 2.4 25.6 1.0
SG A:CYS252 2.4 26.2 1.0
CB A:CYS249 3.1 32.2 1.0
CB A:CYS272 3.3 25.7 1.0
CB A:CYS269 3.3 25.7 1.0
CB A:CYS252 3.4 30.7 1.0
N A:CYS272 3.7 26.4 1.0
N A:CYS252 3.9 26.5 1.0
CE1 A:PHE182 4.0 20.9 1.0
CA A:CYS272 4.1 25.0 1.0
CA A:CYS252 4.2 29.4 1.0
CB A:ARG251 4.5 28.8 0.5
CZ A:PHE182 4.6 22.9 1.0
CB A:ARG271 4.6 28.7 1.0
CA A:CYS249 4.6 32.7 1.0
C A:ARG251 4.7 27.2 0.5
CA A:CYS269 4.7 26.1 1.0
C A:ARG251 4.7 27.2 0.5
C A:ARG271 4.8 26.8 1.0
CB A:THR254 4.8 32.6 1.0
C A:CYS252 4.8 30.2 1.0
CB A:ARG251 4.9 29.8 0.5
N A:GLY253 4.9 26.3 1.0
N A:ARG251 5.0 26.9 0.5
N A:ARG251 5.0 26.9 0.5
CA A:ARG251 5.0 27.3 0.5
OG1 A:THR254 5.0 31.2 1.0

Reference:

Y.Qi, K.Nam, M.C.Spong, A.Banerjee, R.J.Sung, M.Zhang, M.Karplus, G.L.Verdine. Strandwise Translocation of A Dna Glycosylase on Undamaged Dna. Proc.Natl.Acad.Sci.Usa V. 109 1086 2012.
ISSN: ISSN 0027-8424
PubMed: 22219368
DOI: 10.1073/PNAS.1111237108
Page generated: Wed Dec 16 04:49:45 2020

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