Atomistry » Zinc » PDB 3qzc-3rj7 » 3ray
Atomistry »
  Zinc »
    PDB 3qzc-3rj7 »
      3ray »

Zinc in PDB 3ray: Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11

Protein crystallography data

The structure of Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11, PDB code: 3ray was solved by A.Dong, H.Zeng, P.Loppnau, J.R.Walker, C.Bountra, J.Weigelt, C.H.Arrowsmith, A.M.Edwards, J.Min, H.Wu, Structural Genomics Consortium(Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.13 / 1.73
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 31.154, 55.156, 106.283, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 22.8

Other elements in 3ray:

The structure of Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Sodium (Na) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11 (pdb code 3ray). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11, PDB code: 3ray:

Zinc binding site 1 out of 1 in 3ray

Go back to Zinc Binding Sites List in 3ray
Zinc binding site 1 out of 1 in the Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1000

b:56.9
occ:1.00
SG A:CYS43 2.3 71.6 1.0
ND1 A:HIS46 2.4 75.7 1.0
SG A:CYS32 2.4 55.8 1.0
SG A:CYS35 2.5 62.2 1.0
CB A:CYS35 3.2 56.8 1.0
CB A:CYS32 3.3 52.7 1.0
CE1 A:HIS46 3.3 77.1 1.0
CG A:HIS46 3.4 72.9 1.0
CB A:HIS46 3.7 67.6 1.0
CB A:CYS43 3.7 66.1 1.0
N A:CYS35 3.9 55.0 1.0
N A:HIS46 4.0 71.5 1.0
CA A:CYS35 4.2 56.2 1.0
CB A:ASN45 4.3 78.2 1.0
CA A:HIS46 4.5 69.1 1.0
NE2 A:HIS46 4.5 77.6 1.0
CD2 A:HIS46 4.6 76.2 1.0
C A:ASN45 4.6 79.0 1.0
CB A:SER34 4.7 61.7 1.0
CA A:CYS32 4.7 50.7 1.0
CA A:ASN45 4.8 77.4 1.0
C A:SER34 4.8 60.2 1.0
N A:ASN45 4.8 77.6 1.0

Reference:

A.Dong, H.Zeng, P.Loppnau, J.R.Walker, C.Bountra, J.Weigelt, C.H.Arrowsmith, A.M.Edwards, J.Min, H.Wu, Structural Genomics Consortium (Sgc). Crystal Structure of Methyltransferase Domain of Human Pr Domain-Containing Protein 11 To Be Published.
Page generated: Sat Oct 26 14:41:56 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy