Atomistry » Zinc » PDB 3qz2-3rig » 3ray
Atomistry »
  Zinc »
    PDB 3qz2-3rig »
      3ray »

Zinc in PDB 3ray: Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11

Protein crystallography data

The structure of Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11, PDB code: 3ray was solved by A.Dong, H.Zeng, P.Loppnau, J.R.Walker, C.Bountra, J.Weigelt, C.H.Arrowsmith, A.M.Edwards, J.Min, H.Wu, Structural Genomics Consortium(Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.13 / 1.73
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 31.154, 55.156, 106.283, 90.00, 90.00, 90.00
R / Rfree (%) 19.4 / 22.8

Other elements in 3ray:

The structure of Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Sodium (Na) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11 (pdb code 3ray). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11, PDB code: 3ray:

Zinc binding site 1 out of 1 in 3ray

Go back to Zinc Binding Sites List in 3ray
Zinc binding site 1 out of 1 in the Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Methyltransferase Domain of Human Pr Domain- Containing Protein 11 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1000

b:56.9
occ:1.00
SG A:CYS43 2.3 71.6 1.0
ND1 A:HIS46 2.4 75.7 1.0
SG A:CYS32 2.4 55.8 1.0
SG A:CYS35 2.5 62.2 1.0
CB A:CYS35 3.2 56.8 1.0
CB A:CYS32 3.3 52.7 1.0
CE1 A:HIS46 3.3 77.1 1.0
CG A:HIS46 3.4 72.9 1.0
CB A:HIS46 3.7 67.6 1.0
CB A:CYS43 3.7 66.1 1.0
N A:CYS35 3.9 55.0 1.0
N A:HIS46 4.0 71.5 1.0
CA A:CYS35 4.2 56.2 1.0
CB A:ASN45 4.3 78.2 1.0
CA A:HIS46 4.5 69.1 1.0
NE2 A:HIS46 4.5 77.6 1.0
CD2 A:HIS46 4.6 76.2 1.0
C A:ASN45 4.6 79.0 1.0
CB A:SER34 4.7 61.7 1.0
CA A:CYS32 4.7 50.7 1.0
CA A:ASN45 4.8 77.4 1.0
C A:SER34 4.8 60.2 1.0
N A:ASN45 4.8 77.6 1.0

Reference:

A.Dong, H.Zeng, P.Loppnau, J.R.Walker, C.Bountra, J.Weigelt, C.H.Arrowsmith, A.M.Edwards, J.Min, H.Wu, Structural Genomics Consortium (Sgc). Crystal Structure of Methyltransferase Domain of Human Pr Domain-Containing Protein 11 To Be Published.
Page generated: Wed Dec 16 04:47:01 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy