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Zinc in PDB 3qz6: The Crystal Structure of Hpch/Hpai Aldolase From Desulfitobacterium Hafniense Dcb-2

Protein crystallography data

The structure of The Crystal Structure of Hpch/Hpai Aldolase From Desulfitobacterium Hafniense Dcb-2, PDB code: 3qz6 was solved by K.Tan, G.Chhor, S.Clancy, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.83 / 2.00
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 131.531, 131.531, 176.356, 90.00, 90.00, 120.00
R / Rfree (%) 15.2 / 17.2

Zinc Binding Sites:

The binding sites of Zinc atom in the The Crystal Structure of Hpch/Hpai Aldolase From Desulfitobacterium Hafniense Dcb-2 (pdb code 3qz6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the The Crystal Structure of Hpch/Hpai Aldolase From Desulfitobacterium Hafniense Dcb-2, PDB code: 3qz6:

Zinc binding site 1 out of 1 in 3qz6

Go back to Zinc Binding Sites List in 3qz6
Zinc binding site 1 out of 1 in the The Crystal Structure of Hpch/Hpai Aldolase From Desulfitobacterium Hafniense Dcb-2


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of The Crystal Structure of Hpch/Hpai Aldolase From Desulfitobacterium Hafniense Dcb-2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn259

b:29.9
occ:0.40
N A:TYR22 3.2 15.3 1.0
N A:ASN23 3.2 17.1 1.0
CG1 A:VAL21 3.6 14.3 1.0
CB A:ASN23 3.7 15.3 1.0
CA A:VAL21 3.8 15.4 1.0
C A:VAL21 4.0 19.0 1.0
CA A:ASN23 4.0 9.6 1.0
C A:TYR22 4.1 17.9 1.0
CA A:TYR22 4.1 17.6 1.0
CB A:VAL21 4.3 16.9 1.0
CG A:TYR22 4.4 13.2 1.0
CD1 A:TYR22 4.4 15.2 1.0
CD2 A:TYR22 4.6 22.2 1.0
CE1 A:TYR22 4.7 16.6 1.0
CG2 A:VAL21 4.8 14.4 1.0
O A:LEU20 4.8 17.7 1.0
CB A:TYR22 4.8 11.4 1.0
CE2 A:TYR22 4.9 19.7 1.0
CZ A:TYR22 4.9 19.7 1.0
N A:VAL21 5.0 15.6 1.0

Reference:

K.Tan, G.Chhor, S.Clancy, A.Joachimiak. The Crystal Structure of Hpch/Hpai Aldolase From Desulfitobacterium Hafniense Dcb-2 To Be Published.
Page generated: Wed Dec 16 04:46:33 2020

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