Zinc in PDB 3na7: 2.2 Angstrom Structure of the HP0958 Protein From Helicobacter Pylori Ccug 17874

The structure of 2.2 Angstrom Structure of the HP0958 Protein From Helicobacter Pylori Ccug 17874, PDB code: 3na7 was solved by D.L.Caly, P.W.O'toole, S.A.Moore, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 2.20
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	172.720, 37.951, 66.056, 90.00, 110.66, 90.00
R / Rfree (%)	24.8 / 29.4

The structure of 2.2 Angstrom Structure of the HP0958 Protein From Helicobacter Pylori Ccug 17874 also contains other interesting chemical elements:

Magnesium

(Mg)

1 atom

The binding sites of Zinc atom in the 2.2 Angstrom Structure of the HP0958 Protein From Helicobacter Pylori Ccug 17874 (pdb code 3na7). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the 2.2 Angstrom Structure of the HP0958 Protein From Helicobacter Pylori Ccug 17874, PDB code: 3na7:

Zinc binding site 1 out of 1 in the 2.2 Angstrom Structure of the HP0958 Protein From Helicobacter Pylori Ccug 17874


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of 2.2 Angstrom Structure of the HP0958 Protein From Helicobacter Pylori Ccug 17874 within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn300 b:56.4 occ:1.00 SG A:CYS199 2.1 58.0 1.0 SG A:CYS202 2.4 58.5 1.0 SG A:CYS226 2.4 50.5 1.0 SG A:CYS223 2.5 66.0 1.0 CB A:CYS199 2.8 57.3 1.0 CB A:CYS223 3.2 63.0 1.0 CB A:CYS202 3.3 57.6 1.0 N A:CYS202 3.5 57.0 1.0 CB A:CYS226 3.6 54.6 1.0 CA A:CYS202 4.0 58.0 1.0 N A:CYS226 4.0 57.6 1.0 CA A:CYS199 4.3 59.7 1.0 CA A:CYS226 4.4 55.8 1.0 C A:GLY201 4.5 55.3 1.0 CB A:TYR225 4.6 62.8 1.0 CA A:CYS223 4.6 64.3 1.0 NH1 A:ARG228 4.7 49.4 1.0 CD2 A:TYR225 4.7 65.2 1.0 C A:CYS202 4.8 58.9 1.0 C A:TYR225 4.8 60.0 1.0 CD A:ARG228 4.9 52.8 1.0 CA A:GLY201 4.9 55.3 1.0 O A:HOH409 4.9 39.5 1.0 N A:GLY201 4.9 58.0 1.0 N A:PHE203 4.9 60.6 1.0 C A:CYS199 4.9 58.7 1.0 CB A:ARG228 5.0 52.7 1.0

D.L.Caly, P.W.O'toole, S.A.Moore. The 2.2-A Structure of the HP0958 Protein From Helicobacter Pylori Reveals A Kinked Anti-Parallel Coiled-Coil Hairpin Domain and A Highly Conserved Zn-Ribbon Domain J.Mol.Biol. V. 403 405 2010.
ISSN: ISSN 0022-2836
PubMed: 20826163
DOI: 10.1016/J.JMB.2010.08.051