Zinc binding site 1 out of 6 in 3ltv
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Zinc in the PDB 3ltv. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: His46, A: His63, A: His71, A: Gly72, A: His80, A: Asp83, A: Lys136, A: Hoh161, |
conact list:
Atom | Atom | Distance (A) | Zn | ND1 A:His46 | 4.92 | Zn | NE2 A:His63 | 4.17 | Zn | CB A:His63 | 3.47 | Zn | ND1 A:His63 | 2.10 | Zn | CD2 A:His63 | 4.23 | Zn | CE1 A:His63 | 3.04 | Zn | CG A:His63 | 3.12 | Zn | NE2 A:His71 | 4.19 | Zn | N A:His71 | 4.91 | Zn | CB A:His71 | 3.55 | Zn | ND1 A:His71 | 2.13 | Zn | CD2 A:His71 | 4.28 | Zn | C A:His71 | 4.90 | Zn | CE1 A:His71 | 3.04 | Zn | CG A:His71 | 3.18 | Zn | CA A:His71 | 3.93 | Zn | O A:Gly72 | 4.99 | Zn | N A:Gly72 | 4.72 | Zn | NE2 A:His80 | 4.07 | Zn | N A:His80 | 4.75 | Zn | CB A:His80 | 3.61 | Zn | ND1 A:His80 | 2.05 | Zn | CD2 A:His80 | 4.22 | Zn | CE1 A:His80 | 2.89 | Zn | CG A:His80 | 3.17 | Zn | CA A:His80 | 4.81 | Zn | N A:Asp83 | 4.95 | Zn | CB A:Asp83 | 4.09 | Zn | OD2 A:Asp83 | 1.98 | Zn | OD1 A:Asp83 | 2.71 | Zn | CG A:Asp83 | 2.64 | Zn | CA A:Asp83 | 4.63 | Zn | O A:Lys136 | 3.74 | Zn | C A:Lys136 | 4.70 | Zn | O A:Hoh161 | 4.66 |
| interactive model:
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Zinc binding site 2 out of 6 in 3ltv
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Zinc in the PDB 3ltv. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: His63, B: His71, B: Gly72, B: His80, B: Asp83, B: Lys136, B: Hoh166, |
conact list:
Atom | Atom | Distance (A) | Zn | NE2 B:His63 | 4.30 | Zn | CB B:His63 | 3.36 | Zn | ND1 B:His63 | 2.20 | Zn | CD2 B:His63 | 4.28 | Zn | CE1 B:His63 | 3.21 | Zn | CG B:His63 | 3.13 | Zn | CA B:His63 | 4.89 | Zn | NE2 B:His71 | 4.14 | Zn | N B:His71 | 4.90 | Zn | CB B:His71 | 3.59 | Zn | ND1 B:His71 | 2.10 | Zn | CD2 B:His71 | 4.26 | Zn | C B:His71 | 4.96 | Zn | CE1 B:His71 | 2.98 | Zn | CG B:His71 | 3.18 | Zn | CA B:His71 | 3.95 | Zn | N B:Gly72 | 4.89 | Zn | NE2 B:His80 | 4.06 | Zn | N B:His80 | 4.62 | Zn | CB B:His80 | 3.47 | Zn | ND1 B:His80 | 2.12 | Zn | CD2 B:His80 | 4.13 | Zn | CE1 B:His80 | 2.99 | Zn | CG B:His80 | 3.08 | Zn | CA B:His80 | 4.67 | Zn | N B:Asp83 | 4.79 | Zn | CB B:Asp83 | 4.15 | Zn | OD2 B:Asp83 | 1.92 | Zn | OD1 B:Asp83 | 2.89 | Zn | CG B:Asp83 | 2.72 | Zn | CA B:Asp83 | 4.61 | Zn | O B:Lys136 | 3.93 | Zn | C B:Lys136 | 4.91 | Zn | O B:Hoh166 | 4.91 |
| interactive model:
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Zinc binding site 3 out of 6 in 3ltv
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 3 of Zinc in the PDB 3ltv. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: C: His63, C: Lys70, C: His71, C: Gly72, C: His80, C: Asp83, C: Lys136, |
conact list:
Atom | Atom | Distance (A) | Zn | NE2 C:His63 | 4.24 | Zn | CB C:His63 | 3.55 | Zn | ND1 C:His63 | 2.83 | Zn | CD2 C:His63 | 4.13 | Zn | CE1 C:His63 | 3.54 | Zn | CG C:His63 | 3.28 | Zn | O C:Lys70 | 4.80 | Zn | NE2 C:His71 | 4.45 | Zn | N C:His71 | 4.83 | Zn | CB C:His71 | 3.91 | Zn | ND1 C:His71 | 2.60 | Zn | CD2 C:His71 | 4.57 | Zn | C C:His71 | 4.95 | Zn | CE1 C:His71 | 3.36 | Zn | CG C:His71 | 3.55 | Zn | CA C:His71 | 3.99 | Zn | N C:Gly72 | 4.94 | Zn | O C:His80 | 4.84 | Zn | NE2 C:His80 | 3.78 | Zn | N C:His80 | 3.85 | Zn | CB C:His80 | 2.96 | Zn | ND1 C:His80 | 2.14 | Zn | CD2 C:His80 | 3.61 | Zn | C C:His80 | 4.88 | Zn | CE1 C:His80 | 3.02 | Zn | CG C:His80 | 2.64 | Zn | CA C:His80 | 4.01 | Zn | N C:Asp83 | 4.85 | Zn | CB C:Asp83 | 3.67 | Zn | OD2 C:Asp83 | 3.24 | Zn | OD1 C:Asp83 | 2.63 | Zn | CG C:Asp83 | 2.88 | Zn | CA C:Asp83 | 4.40 | Zn | O C:Lys136 | 3.94 |
| interactive model:
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Zinc binding site 4 out of 6 in 3ltv
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 4 of Zinc in the PDB 3ltv. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: D: His63, D: His71, D: Gly72, D: His80, D: Asp83, D: Lys136, |
conact list:
Atom | Atom | Distance (A) | Zn | NE2 D:His63 | 3.98 | Zn | CB D:His63 | 3.48 | Zn | ND1 D:His63 | 1.95 | Zn | CD2 D:His63 | 4.10 | Zn | CE1 D:His63 | 2.83 | Zn | CG D:His63 | 3.04 | Zn | NE2 D:His71 | 3.87 | Zn | CB D:His71 | 3.56 | Zn | ND1 D:His71 | 1.87 | Zn | CD2 D:His71 | 4.05 | Zn | C D:His71 | 4.83 | Zn | CE1 D:His71 | 2.68 | Zn | CG D:His71 | 3.04 | Zn | CA D:His71 | 3.95 | Zn | N D:Gly72 | 4.61 | Zn | NE2 D:His80 | 4.26 | Zn | N D:His80 | 4.79 | Zn | CB D:His80 | 3.75 | Zn | ND1 D:His80 | 2.68 | Zn | CD2 D:His80 | 4.29 | Zn | CE1 D:His80 | 3.38 | Zn | CG D:His80 | 3.39 | Zn | CA D:His80 | 4.88 | Zn | N D:Asp83 | 4.84 | Zn | CB D:Asp83 | 4.13 | Zn | OD2 D:Asp83 | 2.79 | Zn | OD1 D:Asp83 | 2.11 | Zn | CG D:Asp83 | 2.72 | Zn | CA D:Asp83 | 4.59 | Zn | O D:Lys136 | 3.93 | Zn | C D:Lys136 | 4.71 |
| interactive model:
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Zinc binding site 5 out of 6 in 3ltv
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 5 of Zinc in the PDB 3ltv. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: E: His46, E: His63, E: His71, E: Gly72, E: His80, E: Asp83, E: Lys136, |
conact list:
Atom | Atom | Distance (A) | Zn | ND1 E:His46 | 4.67 | Zn | NE2 E:His63 | 4.34 | Zn | CB E:His63 | 3.27 | Zn | ND1 E:His63 | 2.22 | Zn | CD2 E:His63 | 4.28 | Zn | CE1 E:His63 | 3.27 | Zn | CG E:His63 | 3.10 | Zn | CA E:His63 | 4.81 | Zn | NE2 E:His71 | 4.46 | Zn | N E:His71 | 4.84 | Zn | CB E:His71 | 3.67 | Zn | ND1 E:His71 | 2.39 | Zn | CD2 E:His71 | 4.52 | Zn | C E:His71 | 4.69 | Zn | CE1 E:His71 | 3.32 | Zn | CG E:His71 | 3.39 | Zn | CA E:His71 | 3.83 | Zn | O E:Gly72 | 4.90 | Zn | N E:Gly72 | 4.49 | Zn | NE2 E:His80 | 3.93 | Zn | N E:His80 | 4.53 | Zn | CB E:His80 | 3.54 | Zn | ND1 E:His80 | 1.93 | Zn | CD2 E:His80 | 4.09 | Zn | CE1 E:His80 | 2.76 | Zn | CG E:His80 | 3.06 | Zn | CA E:His80 | 4.66 | Zn | CB E:Asp83 | 4.22 | Zn | OD2 E:Asp83 | 2.30 | Zn | OD1 E:Asp83 | 2.50 | Zn | CG E:Asp83 | 2.72 | Zn | CA E:Asp83 | 4.91 | Zn | O E:Lys136 | 4.04 |
| interactive model:
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Zinc binding site 6 out of 6 in 3ltv
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 6 of Zinc in the PDB 3ltv. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Zinc atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: F: His46, F: His63, F: His71, F: Gly72, F: His80, F: Asp83, F: Lys136, |
conact list:
Atom | Atom | Distance (A) | Zn | ND1 F:His46 | 4.78 | Zn | NE2 F:His63 | 3.99 | Zn | CB F:His63 | 3.52 | Zn | ND1 F:His63 | 1.98 | Zn | CD2 F:His63 | 4.13 | Zn | CE1 F:His63 | 2.83 | Zn | CG F:His63 | 3.07 | Zn | NE2 F:His71 | 4.20 | Zn | N F:His71 | 4.82 | Zn | CB F:His71 | 3.43 | Zn | ND1 F:His71 | 2.12 | Zn | CD2 F:His71 | 4.24 | Zn | C F:His71 | 4.75 | Zn | CE1 F:His71 | 3.08 | Zn | CG F:His71 | 3.12 | Zn | CA F:His71 | 3.81 | Zn | N F:Gly72 | 4.57 | Zn | NE2 F:His80 | 4.11 | Zn | N F:His80 | 4.67 | Zn | CB F:His80 | 3.58 | Zn | ND1 F:His80 | 2.11 | Zn | CD2 F:His80 | 4.22 | Zn | CE1 F:His80 | 2.97 | Zn | CG F:His80 | 3.17 | Zn | CA F:His80 | 4.75 | Zn | N F:Asp83 | 4.97 | Zn | CB F:Asp83 | 4.15 | Zn | OD2 F:Asp83 | 2.02 | Zn | OD1 F:Asp83 | 2.85 | Zn | CG F:Asp83 | 2.74 | Zn | CA F:Asp83 | 4.68 | Zn | O F:Lys136 | 3.81 | Zn | C F:Lys136 | 4.78 |
| interactive model:
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