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Zinc in PDB 3lju: Crystal Structure of Full Length Centaurin Alpha-1 Bound with the Head Group of PIP3

Protein crystallography data

The structure of Crystal Structure of Full Length Centaurin Alpha-1 Bound with the Head Group of PIP3, PDB code: 3lju was solved by L.Shen, Y.Tong, W.Tempel, F.Mackenzie, C.H.Arrowsmith, A.M.Edwards, C.Bountra, J.Weigelt, A.Bochkarev, H.Park, Structural Genomicsconsortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 51.727, 66.414, 127.219, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 23.1

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Full Length Centaurin Alpha-1 Bound with the Head Group of PIP3 (pdb code 3lju). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Full Length Centaurin Alpha-1 Bound with the Head Group of PIP3, PDB code: 3lju:

Zinc binding site 1 out of 1 in 3lju

Go back to Zinc Binding Sites List in 3lju
Zinc binding site 1 out of 1 in the Crystal Structure of Full Length Centaurin Alpha-1 Bound with the Head Group of PIP3


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Full Length Centaurin Alpha-1 Bound with the Head Group of PIP3 within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Zn401

b:9.3
occ:1.00
SG X:CYS21 2.3 7.0 1.0
SG X:CYS24 2.3 12.1 1.0
SG X:CYS44 2.3 11.5 1.0
SG X:CYS41 2.4 11.3 1.0
CB X:CYS44 3.2 8.7 1.0
CB X:CYS21 3.3 6.1 1.0
CB X:CYS24 3.4 9.6 1.0
CB X:CYS41 3.5 11.5 1.0
N X:CYS24 3.7 11.1 1.0
N X:CYS41 3.9 7.9 1.0
O X:HOH622 4.0 19.2 1.0
CA X:CYS24 4.1 10.4 1.0
N X:CYS44 4.2 10.3 1.0
CA X:CYS41 4.3 8.2 1.0
CA X:CYS44 4.3 8.8 1.0
O X:HOH414 4.4 12.1 1.0
O X:HOH633 4.6 19.3 1.0
CB X:ALA26 4.7 12.9 1.0
C X:ASP23 4.7 8.9 1.0
CA X:CYS21 4.7 5.7 1.0
C X:CYS24 4.8 9.4 1.0
CB X:ASP23 4.8 9.5 1.0
N X:GLY25 4.9 9.3 1.0
C X:CYS41 4.9 9.3 1.0
N X:ALA26 4.9 10.9 1.0
N X:ASP23 5.0 7.1 1.0
O X:CYS41 5.0 9.8 1.0

Reference:

Y.Tong, W.Tempel, H.Wang, K.Yamada, L.Shen, G.A.Senisterra, F.Mackenzie, A.H.Chishti, H.W.Park. Phosphorylation-Independent Dual-Site Binding of the Fha Domain of KIF13 Mediates Phosphoinositide Transport Via Centaurin ALPHA1. Proc.Natl.Acad.Sci.Usa V. 107 20346 2010.
ISSN: ISSN 0027-8424
PubMed: 21057110
DOI: 10.1073/PNAS.1009008107
Page generated: Wed Dec 16 04:32:28 2020

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