Atomistry » Zinc » PDB 2ytt-2z3j » 3l7t
Atomistry »
  Zinc »
    PDB 2ytt-2z3j »
      3l7t »

Zinc in PDB 3l7t: Crystal Structure of Smu.1112C

Protein crystallography data

The structure of Crystal Structure of Smu.1112C, PDB code: 3l7t was solved by X.-X.Fan, K.-T.Wang, X.-D.Su, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.83 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 47.603, 72.577, 86.851, 90.00, 94.45, 90.00
R / Rfree (%) 22.2 / 26.2

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Smu.1112C (pdb code 3l7t). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Smu.1112C, PDB code: 3l7t:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 3l7t

Go back to Zinc Binding Sites List in 3l7t
Zinc binding site 1 out of 2 in the Crystal Structure of Smu.1112C


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Smu.1112C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn401

b:58.7
occ:0.50
NE2 D:HIS84 2.1 30.6 1.0
NE2 A:HIS8 2.4 23.1 1.0
OE1 A:GLU55 2.8 28.9 1.0
OE1 D:GLU131 2.8 44.0 1.0
CE1 D:HIS84 2.9 30.2 1.0
CD2 D:HIS84 3.2 26.5 1.0
CE1 A:HIS8 3.4 24.1 1.0
CD2 A:HIS8 3.4 19.6 1.0
CD A:GLU55 3.6 29.7 1.0
OE2 A:GLU55 3.8 32.0 1.0
CD D:GLU131 3.9 32.1 1.0
ND1 D:HIS84 4.1 27.8 1.0
O A:HOH166 4.1 33.6 1.0
OE2 D:GLU131 4.2 37.3 1.0
CG D:HIS84 4.3 24.0 1.0
CZ D:PHE121 4.4 32.5 1.0
ND1 A:HIS8 4.5 23.2 1.0
CG A:HIS8 4.5 19.8 1.0
CB A:ALA10 4.5 17.8 1.0
CE2 A:PHE57 4.9 21.1 1.0
CG A:GLU55 4.9 27.0 1.0
CZ A:PHE57 4.9 23.1 1.0

Zinc binding site 2 out of 2 in 3l7t

Go back to Zinc Binding Sites List in 3l7t
Zinc binding site 2 out of 2 in the Crystal Structure of Smu.1112C


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Smu.1112C within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn400

b:73.0
occ:0.50
NE2 C:HIS84 1.9 31.9 1.0
NE2 B:HIS8 2.3 27.4 1.0
OE1 B:GLU55 2.6 39.1 1.0
CE1 C:HIS84 2.6 33.3 1.0
OE1 C:GLU131 3.0 40.1 1.0
CD2 C:HIS84 3.1 31.6 1.0
CD2 B:HIS8 3.2 22.1 1.0
CE1 B:HIS8 3.2 23.7 1.0
CD B:GLU55 3.5 42.9 1.0
OE2 B:GLU55 3.8 44.2 1.0
ND1 C:HIS84 3.8 31.7 1.0
CD C:GLU131 4.0 41.7 1.0
CG C:HIS84 4.1 30.0 1.0
CB B:ALA10 4.3 22.4 1.0
ND1 B:HIS8 4.3 23.7 1.0
CG B:HIS8 4.4 22.9 1.0
OE2 C:GLU131 4.4 49.6 1.0
CZ C:PHE121 4.4 49.5 1.0
CE2 B:PHE57 4.8 31.5 1.0
CZ B:PHE57 4.9 32.3 1.0
CG B:GLU55 4.9 37.4 1.0

Reference:

X.-X.Fan, K.-T.Wang, X.-D.Su. Crystal Structure of Smu.1112C To Be Published.
Page generated: Sat Sep 26 11:22:06 2020
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy