Atomistry » Zinc » PDB 3h67-3hi2 » 3hcj
Atomistry »
  Zinc »
    PDB 3h67-3hi2 »
      3hcj »

Zinc in PDB 3hcj: Structure of Msrb From Xanthomonas Campestris (Oxidized Form)

Enzymatic activity of Structure of Msrb From Xanthomonas Campestris (Oxidized Form)

All present enzymatic activity of Structure of Msrb From Xanthomonas Campestris (Oxidized Form):
1.8.4.11;

Protein crystallography data

The structure of Structure of Msrb From Xanthomonas Campestris (Oxidized Form), PDB code: 3hcj was solved by F.M.Ranaivoson, B.Kauffmann, F.Favier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.27 / 1.66
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 44.197, 65.303, 57.957, 90.00, 94.81, 90.00
R / Rfree (%) 20.1 / 24.8

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of Msrb From Xanthomonas Campestris (Oxidized Form) (pdb code 3hcj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Structure of Msrb From Xanthomonas Campestris (Oxidized Form), PDB code: 3hcj:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 3hcj

Go back to Zinc Binding Sites List in 3hcj
Zinc binding site 1 out of 2 in the Structure of Msrb From Xanthomonas Campestris (Oxidized Form)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Msrb From Xanthomonas Campestris (Oxidized Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1000

b:15.1
occ:1.00
SG A:CYS102 2.3 15.3 1.0
SG A:CYS105 2.3 16.2 1.0
SG A:CYS56 2.3 15.4 1.0
SG A:CYS53 2.4 12.9 1.0
CB A:CYS102 3.1 15.3 1.0
CB A:CYS53 3.1 12.4 1.0
CB A:CYS56 3.3 13.1 1.0
CB A:CYS105 3.5 15.6 1.0
N A:CYS105 3.8 15.4 1.0
N A:CYS56 3.8 12.9 1.0
CA A:CYS56 4.1 13.3 1.0
CA A:CYS105 4.2 15.4 1.0
CA A:CYS102 4.5 15.2 1.0
CA A:CYS53 4.6 12.8 1.0
CB A:LEU58 4.7 13.4 1.0
CB A:ARG104 4.7 15.0 1.0
C A:CYS56 4.7 11.7 1.0
CB A:LEU55 4.8 13.1 1.0
C A:ARG104 4.8 15.9 1.0
N A:GLY57 4.9 12.2 1.0
CB A:SER107 4.9 14.3 1.0
C A:CYS105 4.9 16.0 1.0
OG A:SER107 4.9 15.2 1.0
C A:LEU55 4.9 13.3 1.0
N A:LEU58 4.9 12.9 1.0
N A:ASP106 5.0 16.3 1.0

Zinc binding site 2 out of 2 in 3hcj

Go back to Zinc Binding Sites List in 3hcj
Zinc binding site 2 out of 2 in the Structure of Msrb From Xanthomonas Campestris (Oxidized Form)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Structure of Msrb From Xanthomonas Campestris (Oxidized Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn1000

b:13.7
occ:1.00
SG B:CYS102 2.3 13.9 1.0
SG B:CYS105 2.3 14.7 1.0
SG B:CYS53 2.4 13.6 1.0
SG B:CYS56 2.4 14.7 1.0
CB B:CYS102 3.1 14.4 1.0
CB B:CYS53 3.1 13.1 1.0
CB B:CYS56 3.3 11.3 1.0
CB B:CYS105 3.4 13.8 1.0
N B:CYS105 3.8 14.4 1.0
N B:CYS56 3.9 12.5 1.0
CA B:CYS56 4.1 12.6 1.0
CA B:CYS105 4.1 13.8 1.0
CA B:CYS53 4.5 12.3 1.0
CA B:CYS102 4.5 13.9 1.0
CB B:SER107 4.7 14.1 1.0
CB B:ARG104 4.7 12.8 1.0
CB B:LEU58 4.7 12.2 1.0
OG B:SER107 4.8 14.7 1.0
C B:CYS56 4.8 12.9 1.0
C B:CYS105 4.8 14.1 1.0
C B:ARG104 4.9 14.4 1.0
CB B:LEU55 4.9 13.0 1.0
N B:GLY57 4.9 12.4 1.0
N B:LEU58 4.9 11.7 1.0
C B:LEU55 5.0 13.5 1.0

Reference:

F.M.Ranaivoson, F.Neiers, B.Kauffmann, S.Boschi-Muller, G.Branlant, F.Favier. Methionine Sulfoxide Reductase B Displays A High Level of Flexibility. J.Mol.Biol. 2009.
ISSN: ESSN 1089-8638
PubMed: 19733575
DOI: 10.1016/J.JMB.2009.08.073
Page generated: Wed Dec 16 04:23:35 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy