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Zinc in PDB 3g64: Crystal Structure of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2)

Protein crystallography data

The structure of Crystal Structure of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2), PDB code: 3g64 was solved by Y.Kim, X.Xu, H.Cui, A.Savchenko, A.M.Edwards, A.Joachimiak, Midwest Centerfor Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.60 / 2.05
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 116.167, 191.297, 93.723, 90.00, 90.00, 90.00
R / Rfree (%) 15.4 / 19.4

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2) (pdb code 3g64). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the Crystal Structure of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2), PDB code: 3g64:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in 3g64

Go back to Zinc Binding Sites List in 3g64
Zinc binding site 1 out of 2 in the Crystal Structure of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn278

b:0.7
occ:1.00
O2 B:SO4278 2.2 0.4 1.0
O B:HOH491 3.2 54.6 1.0
S B:SO4278 3.4 0.5 1.0
O4 B:SO4278 3.5 0.6 1.0
O A:HOH349 3.7 27.5 1.0
O C:HOH358 3.8 27.3 1.0
O A:PRO165 4.0 20.9 1.0
O B:HOH320 4.0 38.5 1.0
O B:PRO165 4.0 20.9 1.0
O C:PRO165 4.2 22.3 1.0
O3 B:SO4278 4.2 0.8 1.0
O A:ARG166 4.4 19.8 1.0
O1 B:SO4278 4.4 0.1 1.0
O C:ARG166 4.5 21.1 1.0
O B:ARG166 4.5 24.6 1.0
CA A:ARG166 4.6 16.2 1.0
CA B:ARG166 4.7 22.4 1.0
O B:HOH388 4.7 36.6 1.0
C A:ARG166 4.7 22.0 1.0
CA C:ARG166 4.8 22.8 1.0
C B:ARG166 4.8 24.9 1.0
C C:ARG166 4.8 24.3 1.0
CA A:GLY169 4.9 22.2 1.0
CA B:GLY169 4.9 18.6 1.0
O B:HOH362 4.9 38.5 1.0
O A:HOH465 4.9 44.0 1.0
N A:GLY169 5.0 23.2 1.0
CA C:GLY169 5.0 22.0 1.0

Zinc binding site 2 out of 2 in 3g64

Go back to Zinc Binding Sites List in 3g64
Zinc binding site 2 out of 2 in the Crystal Structure of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2)


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Crystal Structure of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn279

b:86.8
occ:1.00
O C:HOH279 2.7 21.4 1.0
O A:HOH330 2.7 18.8 1.0
O B:HOH331 2.7 21.5 1.0
O2 B:SO4279 3.7 0.1 1.0
O4 B:SO4279 3.7 0.1 1.0
O3 B:SO4279 3.8 0.5 1.0
O B:HOH362 3.9 38.5 1.0
O C:LEU233 3.9 19.2 1.0
O A:HOH465 3.9 44.0 1.0
S B:SO4279 3.9 0.8 1.0
O B:LEU233 4.0 23.9 1.0
O B:HOH388 4.1 36.6 1.0
O A:LEU233 4.1 22.0 1.0
O B:HOH287 4.1 25.1 1.0
NH2 B:ARG166 4.2 21.9 1.0
NH2 A:ARG166 4.2 19.6 1.0
NH2 C:ARG166 4.2 18.8 1.0
O A:HOH293 4.3 22.2 1.0
O B:HOH302 4.3 27.7 1.0
O B:HOH491 4.5 54.6 1.0
NE C:ARG166 4.6 18.7 1.0
NE B:ARG166 4.7 19.1 1.0
NE A:ARG166 4.7 19.7 1.0
CZ C:ARG166 4.8 22.3 1.0
CZ B:ARG166 4.8 21.0 1.0
CZ A:ARG166 4.8 20.1 1.0

Reference:

Y.Kim, X.Xu, H.Cui, A.Savchenko, A.M.Edwards, A.Joachimiak. Crystal Structure of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2) To Be Published.
Page generated: Sat Sep 26 10:12:46 2020
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