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Zinc in PDB 3eu5: Crystal Structure of Ftase(Alpha-Subunit; Beta-Subunit Delta C10) in Complex with Biotingpp

Enzymatic activity of Crystal Structure of Ftase(Alpha-Subunit; Beta-Subunit Delta C10) in Complex with Biotingpp

All present enzymatic activity of Crystal Structure of Ftase(Alpha-Subunit; Beta-Subunit Delta C10) in Complex with Biotingpp:
2.5.1.58; 2.5.1.59;

Protein crystallography data

The structure of Crystal Structure of Ftase(Alpha-Subunit; Beta-Subunit Delta C10) in Complex with Biotingpp, PDB code: 3eu5 was solved by Z.Guo, U.T.T.Nguyen, C.Delon, R.S.Bon, W.Blankenfeldt, R.S.Goody, H.Waldmann, D.Wolters, K.Alexandrov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.96 / 2.80
Space group P 61
Cell size a, b, c (Å), α, β, γ (°) 175.065, 175.065, 70.618, 90.00, 90.00, 120.00
R / Rfree (%) 15.3 / 20.7

Zinc Binding Sites:

The binding sites of Zinc atom in the Crystal Structure of Ftase(Alpha-Subunit; Beta-Subunit Delta C10) in Complex with Biotingpp (pdb code 3eu5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of Ftase(Alpha-Subunit; Beta-Subunit Delta C10) in Complex with Biotingpp, PDB code: 3eu5:

Zinc binding site 1 out of 1 in 3eu5

Go back to Zinc Binding Sites List in 3eu5
Zinc binding site 1 out of 1 in the Crystal Structure of Ftase(Alpha-Subunit; Beta-Subunit Delta C10) in Complex with Biotingpp


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of Ftase(Alpha-Subunit; Beta-Subunit Delta C10) in Complex with Biotingpp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Zn428

b:34.9
occ:1.00
 OD2 B:ASP297 2.0 28.4 1.0
NE2 B:HIS362 2.1 30.2 1.0
SG B:CYS299 2.2 35.8 1.0
OD1 B:ASP297 2.5 29.2 1.0
CG B:ASP297 2.6 31.7 1.0
CD2 B:HIS362 3.0 30.0 1.0
CE1 B:HIS362 3.1 31.7 1.0
CB B:CYS299 3.5 32.3 1.0
CE2 B:TYR361 3.8 31.1 1.0
CB B:ASP297 4.0 32.7 1.0
N B:CYS299 4.1 32.2 1.0
ND1 B:HIS362 4.2 32.0 1.0
CG B:HIS362 4.2 30.9 1.0
CB B:ASP352 4.2 43.5 1.0
O B:HOH465 4.2 36.0 1.0
CA B:CYS299 4.4 32.2 1.0
OH B:TYR361 4.4 32.2 1.0
CG B:ASP352 4.4 43.4 1.0
O B:HOH486 4.5 40.2 1.0
CZ B:TYR361 4.6 32.5 1.0
CD2 B:TYR361 4.7 32.2 1.0
CA B:ASP352 4.8 43.5 1.0
OD2 B:ASP352 4.8 42.0 1.0
OD1 B:ASP352 4.8 45.3 1.0

Reference:

U.T.T.Nguyen, Z.Guo, C.Delon, Y.Wu, C.Deraeve, B.Franzel, R.S.Bon, W.Blankenfeldt, R.S.Goody, H.Waldmann, D.Wolters, K.Alexandrov. Analysis of the Eukaryotic Prenylome By Isoprenoid Affinity Tagging Nat.Chem.Biol. V. 5 227 2009.
ISSN: ISSN 1552-4450
PubMed: 19219049
DOI: 10.1038/NCHEMBIO.149
Page generated: Thu Oct 24 12:56:15 2024

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