Atomistry » Zinc » PDB 3ciz-3cyu » 3cr5
Atomistry »
  Zinc »
    PDB 3ciz-3cyu »
      3cr5 »

Zinc in PDB 3cr5: X-Ray Structure of Bovine Pnt-Zn(2+),Ca(2+)-S100B

Protein crystallography data

The structure of X-Ray Structure of Bovine Pnt-Zn(2+),Ca(2+)-S100B, PDB code: 3cr5 was solved by T.H.Charpentier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.46 / 1.85
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 62.883, 62.883, 50.084, 90.00, 90.00, 90.00
R / Rfree (%) 19.2 / 24.3

Other elements in 3cr5:

The structure of X-Ray Structure of Bovine Pnt-Zn(2+),Ca(2+)-S100B also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Zinc Binding Sites:

The binding sites of Zinc atom in the X-Ray Structure of Bovine Pnt-Zn(2+),Ca(2+)-S100B (pdb code 3cr5). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the X-Ray Structure of Bovine Pnt-Zn(2+),Ca(2+)-S100B, PDB code: 3cr5:

Zinc binding site 1 out of 1 in 3cr5

Go back to Zinc Binding Sites List in 3cr5
Zinc binding site 1 out of 1 in the X-Ray Structure of Bovine Pnt-Zn(2+),Ca(2+)-S100B


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of X-Ray Structure of Bovine Pnt-Zn(2+),Ca(2+)-S100B within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Zn96

b:43.2
occ:1.00
NE2 X:HIS15 2.0 46.8 1.0
NE2 X:HIS25 2.2 53.0 1.0
CE1 X:HIS15 2.9 48.0 1.0
CD2 X:HIS15 3.1 43.0 1.0
CD2 X:HIS25 3.2 48.6 1.0
CE1 X:HIS25 3.3 52.6 1.0
ND1 X:HIS15 4.1 47.2 1.0
CG X:HIS15 4.2 43.0 1.0
CG X:HIS25 4.3 46.2 1.0
ND1 X:HIS25 4.3 51.6 1.0

Reference:

T.H.Charpentier, P.T.Wilder, M.A.Liriano, K.M.Varney, E.Pozharski, A.D.Mackerell, A.Coop, E.A.Toth, D.J.Weber. Divalent Metal Ion Complexes of S100B in the Absence and Presence of Pentamidine. J.Mol.Biol. V. 382 56 2008.
ISSN: ISSN 0022-2836
PubMed: 18602402
DOI: 10.1016/J.JMB.2008.06.047
Page generated: Wed Dec 16 04:11:17 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy