Zinc in PDB 3c37: X-Ray Structure of the Putative Zn-Dependent Peptidase Q74D82 at the Resolution 1.7 A. Northeast Structural Genomics Consortium Target GSR143A

The structure of X-Ray Structure of the Putative Zn-Dependent Peptidase Q74D82 at the Resolution 1.7 A. Northeast Structural Genomics Consortium Target GSR143A, PDB code: 3c37 was solved by A.P.Kuzin, Y.Chen, J.Seetharaman, S.M.Vorobiev, F.Forouhar, D.Wang, L.Mao, M.Maglaqui, R.Xiao, J.Liu, M.C.Baran, T.B.Acton, B.Rost, G.T.Montelione, L.Tong, J.F.Hunt, Northeast Structural Genomics Consortium (Nesg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.43 / 1.70
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	36.840, 44.613, 71.772, 88.07, 75.18, 65.64
R / Rfree (%)	21.9 / 25.4

The binding sites of Zinc atom in the X-Ray Structure of the Putative Zn-Dependent Peptidase Q74D82 at the Resolution 1.7 A. Northeast Structural Genomics Consortium Target GSR143A (pdb code 3c37). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the X-Ray Structure of the Putative Zn-Dependent Peptidase Q74D82 at the Resolution 1.7 A. Northeast Structural Genomics Consortium Target GSR143A, PDB code: 3c37:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the X-Ray Structure of the Putative Zn-Dependent Peptidase Q74D82 at the Resolution 1.7 A. Northeast Structural Genomics Consortium Target GSR143A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of X-Ray Structure of the Putative Zn-Dependent Peptidase Q74D82 at the Resolution 1.7 A. Northeast Structural Genomics Consortium Target GSR143A within 5.0Å range: probe atom residue distance (Å) B Occ A:Zn301 b:18.6 occ:1.00 OE2 A:GLU162 1.9 21.9 1.0 ND1 A:HIS208 2.0 24.2 1.0 NE2 A:HIS110 2.1 14.8 1.0 NE2 A:HIS106 2.1 15.5 1.0 CD A:GLU162 2.8 21.7 1.0 CE1 A:HIS208 2.9 25.6 1.0 CE1 A:HIS110 2.9 13.9 1.0 OE1 A:GLU162 3.0 26.7 1.0 CD2 A:HIS106 3.0 15.9 1.0 CE1 A:HIS106 3.1 16.8 1.0 CG A:HIS208 3.1 29.3 1.0 CD2 A:HIS110 3.2 13.2 1.0 CB A:HIS208 3.6 32.2 1.0 NE2 A:HIS208 4.0 27.7 1.0 CD2 A:TYR157 4.0 25.0 1.0 ND1 A:HIS110 4.1 12.0 1.0 CG A:HIS106 4.2 15.7 1.0 CD2 A:HIS208 4.2 26.2 1.0 ND1 A:HIS106 4.2 15.9 1.0 CG A:GLU162 4.2 18.7 1.0 CG A:HIS110 4.2 11.4 1.0 OE2 A:GLU107 4.4 23.3 1.0 CA A:HIS208 4.5 33.2 1.0 CE2 A:TYR157 4.5 24.6 1.0 CB A:ALA165 4.7 13.4 1.0 CA A:GLU162 4.7 16.8 1.0 CB A:GLU162 4.9 16.9 1.0 CG A:TYR157 4.9 24.8 1.0

Zinc binding site 2 out of 2 in the X-Ray Structure of the Putative Zn-Dependent Peptidase Q74D82 at the Resolution 1.7 A. Northeast Structural Genomics Consortium Target GSR143A


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of X-Ray Structure of the Putative Zn-Dependent Peptidase Q74D82 at the Resolution 1.7 A. Northeast Structural Genomics Consortium Target GSR143A within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn301 b:18.4 occ:1.00 OE2 B:GLU162 2.0 22.6 1.0 NE2 B:HIS106 2.0 15.6 1.0 ND1 B:HIS208 2.1 39.1 1.0 NE2 B:HIS110 2.1 14.1 1.0 CE1 B:HIS208 2.8 36.9 1.0 CD B:GLU162 2.8 23.8 1.0 CE1 B:HIS110 3.0 12.9 1.0 CD2 B:HIS106 3.0 15.9 1.0 OE1 B:GLU162 3.0 27.7 1.0 CE1 B:HIS106 3.1 17.4 1.0 CD2 B:HIS110 3.2 11.8 1.0 CG B:HIS208 3.3 36.7 1.0 CB B:HIS208 3.8 36.9 1.0 NE2 B:HIS208 4.0 33.5 1.0 CD2 B:TYR157 4.1 24.3 1.0 ND1 B:HIS110 4.1 11.5 1.0 CG B:HIS106 4.1 15.3 1.0 ND1 B:HIS106 4.2 15.7 1.0 CG B:GLU162 4.2 20.0 1.0 CD2 B:HIS208 4.2 37.8 1.0 CG B:HIS110 4.3 10.8 1.0 OE2 B:GLU107 4.4 20.8 1.0 CE2 B:TYR157 4.6 22.8 1.0 CB B:ALA165 4.7 13.8 1.0 CA B:GLU162 4.7 17.7 1.0 CA B:HIS208 4.8 36.8 1.0 CB B:GLU162 4.9 18.6 1.0 CG B:TYR157 5.0 24.9 1.0

A.P.Kuzin, Y.Chen, J.Seetharaman, S.M.Vorobiev, F.Forouhar, D.Wang, L.Mao, M.Maglaqui, R.Xiao, J.Liu, M.C.Baran, T.B.Acton, B.Rost, G.T.Montelione, L.Tong, J.F.Hunt. X-Ray Structure of the Putative Zn-Dependent Peptidase Q74D82 at the Resolution 1.7 A. To Be Published.