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Zinc in PDB 2zup: Updated Crystal Structure of Dsbb-Dsba Complex From E. Coli

Protein crystallography data

The structure of Updated Crystal Structure of Dsbb-Dsba Complex From E. Coli, PDB code: 2zup was solved by K.Inaba, M.Suzuki, S.Murakami, A.Nakagawa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 3.70
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 165.500, 165.500, 65.920, 90.00, 90.00, 90.00
R / Rfree (%) 30.4 / 33.4

Zinc Binding Sites:

The binding sites of Zinc atom in the Updated Crystal Structure of Dsbb-Dsba Complex From E. Coli (pdb code 2zup). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Updated Crystal Structure of Dsbb-Dsba Complex From E. Coli, PDB code: 2zup:

Zinc binding site 1 out of 1 in 2zup

Go back to Zinc Binding Sites List in 2zup
Zinc binding site 1 out of 1 in the Updated Crystal Structure of Dsbb-Dsba Complex From E. Coli


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Updated Crystal Structure of Dsbb-Dsba Complex From E. Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn190

b:0.7
occ:0.50
NE2 A:HIS41 2.2 0.4 1.0
CE1 A:HIS41 3.0 0.7 1.0
CD2 A:HIS41 3.4 0.1 1.0
O A:GLU38 4.2 0.9 1.0
ND1 A:HIS41 4.2 0.5 1.0
O A:VAL39 4.3 0.5 1.0
CG A:HIS41 4.4 0.8 1.0

Reference:

K.Inaba, S.Murakami, A.Nakagawa, H.Iida, M.Kinjo, K.Ito, M.Suzuki. Dynamic Nature of Disulphide Bond Formation Catalysts Revealed By Crystal Structures of Dsbb Embo J. V. 28 779 2009.
ISSN: ISSN 0261-4189
PubMed: 19214188
DOI: 10.1038/EMBOJ.2009.21
Page generated: Wed Dec 16 04:05:46 2020

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