Zinc in PDB 2xs2: Crystal Structure of the Rrm Domain of Mouse Deleted in Azoospermia- Like in Complex with Rna, Uuguucuu

The structure of Crystal Structure of the Rrm Domain of Mouse Deleted in Azoospermia- Like in Complex with Rna, Uuguucuu, PDB code: 2xs2 was solved by H.T.Jenkins, T.A.Edwards, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.41 / 1.35
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	38.100, 52.060, 60.490, 90.00, 90.00, 90.00
R / Rfree (%)	16.1 / 19.3

The binding sites of Zinc atom in the Crystal Structure of the Rrm Domain of Mouse Deleted in Azoospermia- Like in Complex with Rna, Uuguucuu (pdb code 2xs2). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Crystal Structure of the Rrm Domain of Mouse Deleted in Azoospermia- Like in Complex with Rna, Uuguucuu, PDB code: 2xs2:

Zinc binding site 1 out of 1 in the Crystal Structure of the Rrm Domain of Mouse Deleted in Azoospermia- Like in Complex with Rna, Uuguucuu


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Crystal Structure of the Rrm Domain of Mouse Deleted in Azoospermia- Like in Complex with Rna, Uuguucuu within 5.0Å range: probe atom residue distance (Å) B Occ B:Zn1009 b:16.5 occ:1.00 N3 B:C6 2.0 13.6 1.0 ND1 A:HIS123 2.1 20.3 1.0 C2 B:C6 2.8 15.8 1.0 O2 B:C6 2.8 17.2 1.0 CE1 A:HIS123 3.0 25.6 1.0 C4 B:C6 3.1 14.5 1.0 CG A:HIS123 3.1 23.4 1.0 N4 B:C6 3.3 16.3 1.0 CB A:HIS123 3.5 23.2 0.8 NE2 A:HIS123 4.1 25.3 1.0 N1 B:C6 4.1 15.3 1.0 CA A:HIS123 4.2 23.4 0.8 CD2 A:HIS123 4.2 24.6 1.0 O2 B:U7 4.3 15.9 1.0 C5 B:C6 4.4 17.1 1.0 O B:HOH2019 4.5 44.6 1.0 C2 B:U7 4.6 14.4 1.0 O A:HIS123 4.7 25.1 0.8 C A:HIS123 4.8 23.6 0.8 C6 B:C6 4.8 16.8 1.0 O4' B:U7 4.9 16.7 1.0 C1' B:U7 4.9 15.2 1.0 N1 B:U7 4.9 14.9 1.0

H.T.Jenkins, B.Malkova, T.A.Edwards. Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets By the Germ-Cell Regulator Dazl. Proc. Natl. Acad. Sci. V. 108 18266 2011U.S.A..
ISSN: ESSN 1091-6490
PubMed: 22021443
DOI: 10.1073/PNAS.1105211108