Zinc in PDB 2wb0: 2.1 Resolution Structure of the C-Terminal Domain of the Human Adenovirus 5 Ssdna Binding Protein

The structure of 2.1 Resolution Structure of the C-Terminal Domain of the Human Adenovirus 5 Ssdna Binding Protein, PDB code: 2wb0 was solved by J.Hendle, P.N.Kanellopoulos, P.A.Tucker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	14.95 / 1.95
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	78.290, 76.660, 64.690, 90.00, 90.00, 90.00
R / Rfree (%)	18.4 / 24.5

The binding sites of Zinc atom in the 2.1 Resolution Structure of the C-Terminal Domain of the Human Adenovirus 5 Ssdna Binding Protein (pdb code 2wb0). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 2 binding sites of Zinc where determined in the 2.1 Resolution Structure of the C-Terminal Domain of the Human Adenovirus 5 Ssdna Binding Protein, PDB code: 2wb0:
Jump to Zinc binding site number: 1; 2;

Zinc binding site 1 out of 2 in the 2.1 Resolution Structure of the C-Terminal Domain of the Human Adenovirus 5 Ssdna Binding Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of 2.1 Resolution Structure of the C-Terminal Domain of the Human Adenovirus 5 Ssdna Binding Protein within 5.0Å range: probe atom residue distance (Å) B Occ X:Zn601 b:16.4 occ:1.00 ND1 X:HIS286 2.1 16.7 1.0 SG X:CYS284 2.3 16.0 1.0 SG X:CYS339 2.3 17.6 1.0 SG X:CYS355 2.3 17.0 1.0 CE1 X:HIS286 2.9 16.3 1.0 CG X:HIS286 3.2 16.8 1.0 CB X:CYS339 3.2 16.6 1.0 CB X:CYS355 3.2 18.3 1.0 CB X:CYS284 3.3 12.7 1.0 CB X:HIS286 3.6 18.1 1.0 N X:CYS355 3.8 16.9 1.0 N X:HIS286 3.8 16.5 1.0 CA X:CYS339 3.9 16.9 1.0 NE2 X:HIS286 4.1 19.0 1.0 CA X:CYS355 4.2 16.7 1.0 N X:LEU285 4.2 15.4 1.0 CD2 X:HIS286 4.2 16.7 1.0 O X:HOH2154 4.4 16.1 1.0 CA X:HIS286 4.4 16.7 1.0 CA X:CYS284 4.5 13.3 1.0 CD2 X:HIS341 4.6 19.9 1.0 C X:CYS284 4.6 15.3 1.0 C X:CYS339 4.7 16.6 1.0 N X:VAL340 4.7 15.5 1.0 C X:LEU285 4.8 16.5 1.0 C X:SER354 4.9 17.0 1.0 CA X:LEU285 4.9 16.1 1.0

Zinc binding site 2 out of 2 in the 2.1 Resolution Structure of the C-Terminal Domain of the Human Adenovirus 5 Ssdna Binding Protein


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of 2.1 Resolution Structure of the C-Terminal Domain of the Human Adenovirus 5 Ssdna Binding Protein within 5.0Å range: probe atom residue distance (Å) B Occ X:Zn602 b:16.2 occ:1.00 SG X:CYS450 2.3 14.8 1.0 SG X:CYS467 2.3 16.6 1.0 SG X:CYS398 2.3 17.3 1.0 SG X:CYS396 2.4 14.2 1.0 CB X:CYS450 3.3 13.2 1.0 CB X:CYS467 3.3 17.0 1.0 CB X:CYS396 3.4 16.1 1.0 N X:CYS467 3.4 18.3 1.0 CB X:CYS398 3.4 16.2 1.0 N X:CYS398 3.6 17.2 1.0 CA X:CYS450 3.6 15.4 1.0 N X:CYS451 3.9 13.7 1.0 CA X:CYS467 3.9 17.1 1.0 N X:GLU397 4.1 17.4 1.0 CA X:CYS398 4.1 17.6 1.0 C X:ASN466 4.1 21.2 1.0 C X:CYS450 4.2 14.2 1.0 O X:HOH2304 4.3 19.0 1.0 CA X:ASN466 4.4 22.1 1.0 CA X:CYS396 4.6 14.8 1.0 O X:CYS467 4.6 17.5 1.0 C X:CYS467 4.6 17.9 1.0 C X:CYS396 4.6 16.8 1.0 C X:GLU397 4.7 18.8 1.0 CA X:GLU397 4.8 20.2 1.0 CB X:GLU397 4.8 21.6 1.0 O X:HOH2190 4.8 23.0 1.0 N X:CYS450 4.9 13.2 1.0 O X:ASN466 5.0 19.5 1.0

J.Hendle, P.N.Kanellopoulos, P.A.Tucker. High Resolution Structures of the Adenovirus Single-Stranded Dna Binding Protein and the N512P Hinge-Region Mutant To Be Published.