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Zinc in PDB 2vy4: U11-48K Chhc Zn-Finger Domain

Zinc Binding Sites:

The binding sites of Zinc atom in the U11-48K Chhc Zn-Finger Domain (pdb code 2vy4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the U11-48K Chhc Zn-Finger Domain, PDB code: 2vy4:

Zinc binding site 1 out of 1 in 2vy4

Go back to Zinc Binding Sites List in 2vy4
Zinc binding site 1 out of 1 in the U11-48K Chhc Zn-Finger Domain


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of U11-48K Chhc Zn-Finger Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1088

b:0.0
occ:1.00
HE1 A:HIS74 2.0 0.0 1.0
ND1 A:HIS74 2.0 0.0 1.0
ND1 A:HIS64 2.0 0.0 1.0
CE1 A:HIS74 2.2 0.0 1.0
HB2 A:CYS78 2.3 0.0 1.0
SG A:CYS78 2.3 0.0 1.0
SG A:CYS58 2.3 0.0 1.0
HE3 A:MET66 2.5 0.0 1.0
CB A:CYS78 2.6 0.0 1.0
HB3 A:CYS78 2.7 0.0 1.0
CE1 A:HIS64 2.9 0.0 1.0
CG A:HIS64 2.9 0.0 1.0
HB3 A:HIS64 3.2 0.0 1.0
HE1 A:HIS64 3.2 0.0 1.0
HB2 A:ASP61 3.2 0.0 1.0
HB2 A:HIS64 3.3 0.0 1.0
HB3 A:CYS58 3.3 0.0 1.0
CE A:MET66 3.3 0.0 1.0
CB A:HIS64 3.3 0.0 1.0
CG A:HIS74 3.4 0.0 1.0
CB A:CYS58 3.4 0.0 1.0
HE1 A:MET66 3.4 0.0 1.0
NE2 A:HIS74 3.5 0.0 1.0
HE2 A:MET66 3.6 0.0 1.0
HB2 A:CYS58 3.6 0.0 1.0
HB2 A:TYR60 3.7 0.0 1.0
NE2 A:HIS64 3.9 0.0 1.0
CD2 A:HIS64 3.9 0.0 1.0
HD2 A:TYR60 4.0 0.0 1.0
HB2 A:HIS74 4.0 0.0 1.0
CD2 A:HIS74 4.0 0.0 1.0
CA A:CYS78 4.1 0.0 1.0
HE2 A:HIS74 4.1 0.0 1.0
CB A:ASP61 4.2 0.0 1.0
CB A:HIS74 4.3 0.0 1.0
H A:ASP61 4.3 0.0 1.0
HB3 A:ASP61 4.4 0.0 1.0
HA A:CYS78 4.4 0.0 1.0
H A:CYS78 4.6 0.0 1.0
H A:CYS58 4.7 0.0 1.0
O A:HIS74 4.7 0.0 1.0
N A:ASP61 4.8 0.0 1.0
CA A:CYS58 4.8 0.0 1.0
H A:TYR60 4.8 0.0 1.0
CB A:TYR60 4.8 0.0 1.0
HE2 A:HIS64 4.8 0.0 1.0
C A:HIS74 4.9 0.0 1.0
CA A:HIS64 4.9 0.0 1.0
N A:CYS78 4.9 0.0 1.0
HD2 A:HIS64 4.9 0.0 1.0
SD A:MET66 4.9 0.0 1.0
OD2 A:ASP61 4.9 0.0 1.0
C A:CYS78 4.9 0.0 1.0
HA A:MET75 5.0 0.0 1.0
CG A:ASP61 5.0 0.0 1.0
CD2 A:TYR60 5.0 0.0 1.0

Reference:

H.Tidow, A.Andreeva, T.J.Rutherford, A.R.Fersht. Solution Structure of the U11-48K Chhc Zinc-Finger Domain That Specifically Binds the 5' Splice Site of U12-Type Introns. Structure V. 17 294 2009.
ISSN: ISSN 0969-2126
PubMed: 19217400
DOI: 10.1016/J.STR.2008.11.013
Page generated: Wed Dec 16 03:56:35 2020

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