Atomistry » Zinc » PDB 2vqx-2w13 » 2vu4
Atomistry »
  Zinc »
    PDB 2vqx-2w13 »
      2vu4 »

Zinc in PDB 2vu4: Structure of Psbp Protein From Spinacia Oleracea at 1.98 A Resolution

Protein crystallography data

The structure of Structure of Psbp Protein From Spinacia Oleracea at 1.98 A Resolution, PDB code: 2vu4 was solved by M.Lapkouski, R.Ristvejova, J.B.Arellano, J.L.Revuelta, I.Kuta Smatanova, R.Ettrich, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.59 / 1.98
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 36.770, 45.568, 82.495, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 23.3

Zinc Binding Sites:

The binding sites of Zinc atom in the Structure of Psbp Protein From Spinacia Oleracea at 1.98 A Resolution (pdb code 2vu4). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Structure of Psbp Protein From Spinacia Oleracea at 1.98 A Resolution, PDB code: 2vu4:

Zinc binding site 1 out of 1 in 2vu4

Go back to Zinc Binding Sites List in 2vu4
Zinc binding site 1 out of 1 in the Structure of Psbp Protein From Spinacia Oleracea at 1.98 A Resolution


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Structure of Psbp Protein From Spinacia Oleracea at 1.98 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn1187

b:35.2
occ:1.00
OD1 A:ASP165 2.1 33.5 1.0
NE2 A:HIS144 2.2 16.1 1.0
O A:HOH2034 2.2 18.9 1.0
CD2 A:HIS144 3.0 16.8 1.0
CG A:ASP165 3.0 23.5 1.0
CE1 A:HIS144 3.2 22.3 1.0
CB A:ASP165 3.4 22.0 1.0
OD2 A:ASP165 4.0 29.8 1.0
CA A:ASP165 4.1 21.9 1.0
CG A:HIS144 4.1 20.9 1.0
ND1 A:HIS144 4.2 18.8 1.0
CE2 A:PHE169 4.4 30.4 1.0
CG A:LEU132 4.5 22.0 1.0
CD2 A:LEU132 4.7 20.4 1.0
CD1 A:LEU132 5.0 18.2 1.0

Reference:

V.J.Kopecky, J.Kohoutova, M.Lapkouski, K.Hofbauerova, Z.Sovova, O.Ettrichova, S.Gonzalez-Perez, A.Dulebo, D.Kaftan, I.Kuta Smatanova, J.L.Revuelta, J.B.Arellano, J.Carey, R.Ettrich. Raman Spectroscopy Adds Complementary Detail to the High- Resolution X-Ray Crystal Structure of Photosynthetic Psbp From Spinacia Oleracea. Plos One V. 7E46694 2012.
ISSN: ISSN 1932-6203
PubMed: 23071614
DOI: 10.1371/JOURNAL.PONE.0046694
Page generated: Wed Dec 16 03:56:11 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy