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Zinc in PDB 2rsj: Solution Structures of the Dna-Binding Domains of Immune-Related Zinc- Finger Protein Zfat

Zinc Binding Sites:

The binding sites of Zinc atom in the Solution Structures of the Dna-Binding Domains of Immune-Related Zinc- Finger Protein Zfat (pdb code 2rsj). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total 3 binding sites of Zinc where determined in the Solution Structures of the Dna-Binding Domains of Immune-Related Zinc- Finger Protein Zfat, PDB code: 2rsj:
Jump to Zinc binding site number: 1; 2; 3;

Zinc binding site 1 out of 3 in 2rsj

Go back to Zinc Binding Sites List in 2rsj
Zinc binding site 1 out of 3 in the Solution Structures of the Dna-Binding Domains of Immune-Related Zinc- Finger Protein Zfat


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Solution Structures of the Dna-Binding Domains of Immune-Related Zinc- Finger Protein Zfat within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn101

b:0.0
occ:1.00
NE2 A:HIS32 2.1 0.0 1.0
NE2 A:HIS28 2.1 0.0 1.0
SG A:CYS15 2.2 0.0 1.0
SG A:CYS12 2.3 0.0 1.0
HD2 A:HIS32 2.6 0.0 1.0
HB2 A:TYR14 2.6 0.0 1.0
CD2 A:HIS32 2.6 0.0 1.0
H A:CYS15 2.9 0.0 1.0
CD2 A:HIS28 3.1 0.0 1.0
CE1 A:HIS28 3.1 0.0 1.0
CE1 A:HIS32 3.2 0.0 1.0
HD2 A:HIS28 3.3 0.0 1.0
HE1 A:HIS28 3.3 0.0 1.0
HB3 A:CYS12 3.4 0.0 1.0
CB A:CYS12 3.5 0.0 1.0
CB A:CYS15 3.5 0.0 1.0
N A:CYS15 3.5 0.0 1.0
HB2 A:LYS17 3.6 0.0 1.0
HB3 A:CYS15 3.6 0.0 1.0
CB A:TYR14 3.7 0.0 1.0
HD2 A:LYS17 3.7 0.0 1.0
HB2 A:CYS12 3.7 0.0 1.0
HE1 A:HIS32 3.7 0.0 1.0
CG A:HIS32 3.9 0.0 1.0
HB3 A:TYR14 4.1 0.0 1.0
CA A:CYS15 4.1 0.0 1.0
H A:TYR14 4.1 0.0 1.0
ND1 A:HIS32 4.1 0.0 1.0
ND1 A:HIS28 4.2 0.0 1.0
CG A:HIS28 4.2 0.0 1.0
HD23 A:LEU29 4.2 0.0 1.0
HZ A:PHE19 4.3 0.0 1.0
C A:TYR14 4.3 0.0 1.0
HB2 A:CYS15 4.4 0.0 1.0
HD1 A:TYR14 4.4 0.0 1.0
HD12 A:ILE31 4.4 0.0 1.0
CA A:TYR14 4.4 0.0 1.0
H A:LYS17 4.5 0.0 1.0
CG A:TYR14 4.5 0.0 1.0
HG3 A:LYS17 4.5 0.0 1.0
CB A:LYS17 4.6 0.0 1.0
HE1 A:PHE19 4.6 0.0 1.0
N A:TYR14 4.7 0.0 1.0
CD A:LYS17 4.7 0.0 1.0
HA A:LEU29 4.8 0.0 1.0
CD1 A:TYR14 4.8 0.0 1.0
C A:CYS15 4.8 0.0 1.0
CG A:LYS17 4.8 0.0 1.0
CA A:CYS12 4.8 0.0 1.0
HD11 A:ILE31 4.9 0.0 1.0
HA A:CYS15 5.0 0.0 1.0

Zinc binding site 2 out of 3 in 2rsj

Go back to Zinc Binding Sites List in 2rsj
Zinc binding site 2 out of 3 in the Solution Structures of the Dna-Binding Domains of Immune-Related Zinc- Finger Protein Zfat


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 2 of Solution Structures of the Dna-Binding Domains of Immune-Related Zinc- Finger Protein Zfat within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn102

b:0.0
occ:1.00
NE2 A:HIS60 2.0 0.0 1.0
NE2 A:HIS56 2.1 0.0 1.0
SG A:CYS43 2.2 0.0 1.0
SG A:CYS40 2.4 0.0 1.0
H A:CYS43 2.7 0.0 1.0
HB3 A:TYR45 2.8 0.0 1.0
CE1 A:HIS60 2.9 0.0 1.0
HB2 A:GLN42 2.9 0.0 1.0
CE1 A:HIS56 3.0 0.0 1.0
HE1 A:HIS60 3.1 0.0 1.0
CD2 A:HIS60 3.1 0.0 1.0
CD2 A:HIS56 3.2 0.0 1.0
HE1 A:HIS56 3.2 0.0 1.0
HB3 A:CYS40 3.3 0.0 1.0
CB A:CYS40 3.4 0.0 1.0
HD2 A:HIS60 3.4 0.0 1.0
HD2 A:HIS56 3.4 0.0 1.0
N A:CYS43 3.5 0.0 1.0
HB2 A:TYR45 3.5 0.0 1.0
CB A:CYS43 3.5 0.0 1.0
HB2 A:CYS40 3.6 0.0 1.0
CB A:TYR45 3.6 0.0 1.0
HB3 A:CYS43 3.7 0.0 1.0
H A:TYR45 3.9 0.0 1.0
CA A:CYS43 4.0 0.0 1.0
CB A:GLN42 4.0 0.0 1.0
ND1 A:HIS60 4.1 0.0 1.0
ND1 A:HIS56 4.1 0.0 1.0
CG A:HIS60 4.2 0.0 1.0
CG A:HIS56 4.2 0.0 1.0
HB3 A:GLN42 4.3 0.0 1.0
H A:GLN42 4.4 0.0 1.0
HB2 A:CYS43 4.4 0.0 1.0
C A:CYS43 4.4 0.0 1.0
CG A:TYR45 4.4 0.0 1.0
O A:CYS43 4.5 0.0 1.0
C A:GLN42 4.5 0.0 1.0
N A:TYR45 4.6 0.0 1.0
CA A:GLN42 4.7 0.0 1.0
HG3 A:GLN42 4.7 0.0 1.0
HA A:LEU57 4.7 0.0 1.0
CA A:TYR45 4.8 0.0 1.0
HD1 A:TYR45 4.8 0.0 1.0
N A:GLN42 4.8 0.0 1.0
CA A:CYS40 4.8 0.0 1.0
HD23 A:LEU57 4.9 0.0 1.0
CG A:GLN42 4.9 0.0 1.0
CD1 A:TYR45 4.9 0.0 1.0
HD1 A:HIS60 4.9 0.0 1.0
HA A:CYS43 5.0 0.0 1.0
HD1 A:HIS56 5.0 0.0 1.0

Zinc binding site 3 out of 3 in 2rsj

Go back to Zinc Binding Sites List in 2rsj
Zinc binding site 3 out of 3 in the Solution Structures of the Dna-Binding Domains of Immune-Related Zinc- Finger Protein Zfat


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 3 of Solution Structures of the Dna-Binding Domains of Immune-Related Zinc- Finger Protein Zfat within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn103

b:0.0
occ:1.00
NE2 A:HIS88 2.0 0.0 1.0
NE2 A:HIS83 2.1 0.0 1.0
SG A:CYS70 2.3 0.0 1.0
SG A:CYS67 2.3 0.0 1.0
CD2 A:HIS88 2.8 0.0 1.0
CD2 A:HIS83 2.8 0.0 1.0
HD2 A:HIS83 2.9 0.0 1.0
H A:CYS70 2.9 0.0 1.0
HD2 A:HIS88 2.9 0.0 1.0
CE1 A:HIS88 3.0 0.0 1.0
CE1 A:HIS83 3.2 0.0 1.0
HB2 A:TYR69 3.3 0.0 1.0
CB A:CYS67 3.3 0.0 1.0
HB3 A:CYS67 3.3 0.0 1.0
HB3 A:PHE72 3.4 0.0 1.0
HE1 A:HIS88 3.4 0.0 1.0
HG12 A:ILE84 3.4 0.0 1.0
HB2 A:CYS67 3.4 0.0 1.0
HB3 A:CYS70 3.5 0.0 1.0
CB A:CYS70 3.5 0.0 1.0
HE1 A:HIS83 3.6 0.0 1.0
N A:CYS70 3.7 0.0 1.0
CG A:HIS88 3.9 0.0 1.0
ND1 A:HIS88 4.0 0.0 1.0
CG A:HIS83 4.1 0.0 1.0
CA A:CYS70 4.1 0.0 1.0
HA A:ILE84 4.2 0.0 1.0
ND1 A:HIS83 4.2 0.0 1.0
HD2 A:PHE72 4.2 0.0 1.0
CB A:TYR69 4.3 0.0 1.0
HB2 A:PHE72 4.3 0.0 1.0
CB A:PHE72 4.3 0.0 1.0
H A:PHE72 4.4 0.0 1.0
CG1 A:ILE84 4.4 0.0 1.0
H A:TYR69 4.4 0.0 1.0
HB2 A:CYS70 4.4 0.0 1.0
HG13 A:ILE84 4.4 0.0 1.0
HB A:VAL87 4.4 0.0 1.0
HB3 A:TYR69 4.5 0.0 1.0
HD11 A:LEU80 4.6 0.0 1.0
C A:CYS70 4.7 0.0 1.0
C A:TYR69 4.7 0.0 1.0
HG13 A:VAL87 4.8 0.0 1.0
CA A:CYS67 4.8 0.0 1.0
O A:CYS70 4.8 0.0 1.0
HG22 A:ILE84 4.8 0.0 1.0
CA A:TYR69 4.9 0.0 1.0
CD2 A:PHE72 4.9 0.0 1.0
O A:HIS83 4.9 0.0 1.0
HD1 A:HIS88 4.9 0.0 1.0
HD13 A:ILE84 4.9 0.0 1.0
N A:TYR69 5.0 0.0 1.0

Reference:

N.Tochio, T.Umehara, T.Kigawa, S.Yokoyama. Solution Structures of the Dna-Binding Domains of Immune-Related Zinc-Finger Protein Zfat To Be Published.
Page generated: Wed Dec 16 03:52:55 2020

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