Atomistry » Zinc » PDB 2gd8-2gze » 2rc6
Atomistry »
  Zinc »
    PDB 2gd8-2gze »
      2rc6 »

Zinc in PDB 2rc6: Refined Structure of Fnr From Leptospira Interrogans Bound to Nadp+

Enzymatic activity of Refined Structure of Fnr From Leptospira Interrogans Bound to Nadp+

All present enzymatic activity of Refined Structure of Fnr From Leptospira Interrogans Bound to Nadp+:
1.18.1.2;

Protein crystallography data

The structure of Refined Structure of Fnr From Leptospira Interrogans Bound to Nadp+, PDB code: 2rc6 was solved by A.S.Nascimento, D.L.Catalano-Dupuy, E.A.Ceccarelli, I.Polikarpov, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.53 / 2.70
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 67.168, 112.251, 92.399, 90.00, 93.19, 90.00
R / Rfree (%) 23.5 / 27.6

Zinc Binding Sites:

The binding sites of Zinc atom in the Refined Structure of Fnr From Leptospira Interrogans Bound to Nadp+ (pdb code 2rc6). This binding sites where shown within 5.0 Angstroms radius around Zinc atom.
In total only one binding site of Zinc was determined in the Refined Structure of Fnr From Leptospira Interrogans Bound to Nadp+, PDB code: 2rc6:

Zinc binding site 1 out of 1 in 2rc6

Go back to Zinc Binding Sites List in 2rc6
Zinc binding site 1 out of 1 in the Refined Structure of Fnr From Leptospira Interrogans Bound to Nadp+


Mono view


Stereo pair view

A full contact list of Zinc with other atoms in the Zn binding site number 1 of Refined Structure of Fnr From Leptospira Interrogans Bound to Nadp+ within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Zn315

b:38.4
occ:1.00
NE2 A:HIS224 2.3 25.4 1.0
OE1 A:GLU189 2.4 25.0 1.0
OE2 A:GLU189 2.4 37.2 1.0
CE1 A:HIS224 2.7 23.2 1.0
CD A:GLU189 2.7 26.4 1.0
CD2 A:HIS224 3.5 24.3 1.0
O A:LEU188 3.7 20.5 1.0
ND1 A:HIS224 3.8 24.8 1.0
CG A:GLU189 4.2 19.6 1.0
CG A:HIS224 4.3 23.2 1.0
C A:LEU188 4.5 17.0 1.0
CB A:LEU188 4.9 19.8 1.0
CA A:GLU189 4.9 22.9 1.0
CB A:GLU189 5.0 18.0 1.0

Reference:

A.S.Nascimento, D.L.Catalano-Dupuy, A.Bernardes, M.O.Neto, M.A.Santos, E.A.Ceccarelli, I.Polikarpov. Crystal Structures of Leptospira Interrogans Fad-Containing Ferredoxin-Nadp+ Reductase and Its Complex with Nadp+. Bmc Struct.Biol. V. 7 69 2007.
ISSN: ESSN 1472-6807
PubMed: 17958910
DOI: 10.1186/1472-6807-7-69
Page generated: Sat Sep 26 03:49:59 2020
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy